RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 NPHS2Q9NP85 383 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 UBN1Q9NPG3 1134 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 FBXO6Q9NRD1 293 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ARMCX1Q9P291 453 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 USP20Q9Y2K6 914 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 NUB1Q9Y5A7 615 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 PCDHAC2Q9Y5I4 1007 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ERVV-1B6SEH8 477 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 FAM86B1E9PN63 330 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 CYP26A1O43174 497 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 SPOPO43791 374 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 PHF2O75151 1096 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 USP1O94782 785 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 CYP1A1P04798 512 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 FAM86B2P0C5J1 330 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 CALB2P22676 271 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 RRM1P23921 792 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 RPA3P35244 121 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 GNAQP50148 359 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 PEX5P50542 639 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 RPS6KA3P51812 740 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ZNF131P52739 623 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 NRLP54845 237 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 RPS8P62241 208 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 KPNB1Q14974 876 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 RCN1Q15293 331 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ZYXQ15942 572 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 AMHR2Q16671 573 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ZC3H18Q86VM9 953 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 FAM186BQ8IYM0 893 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 MYCT1Q8N699 235 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 INTS2Q9H0H0 1204 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 NUCKS1Q9H1E3 243 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 PSTPIP2Q9H939 334 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 NINJ2Q9NZG7 142 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 KLHL14Q9P2G3 628 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 WRAP73Q9P2S5 460 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 PHTF1Q9UMS5 762 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 DCCP43146 1447 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ZMYM2Q9UBW7 1377 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 CFAP69A5D8W1 941 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 RASA4BC9J798 803 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 PI4K2BG5E9Z4 385 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 DDX39AO00148 427 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 RASA4O43374 803 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 STK10O94804 968 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 TCF4P15884 667 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 PRKCIP41743 596 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 PIK3CAP42336 1068 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 NOP14P78316 857 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 IFI16Q16666 785 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 MUM1Q2TAK8 710 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 TBC1D25Q3MII6 688 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ATP13A4Q4VNC1 1196 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 TNFAIP8L3Q5GJ75 292 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 MEX3CQ5U5Q3 659 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 INTS8Q75QN2 995 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 TPH2Q8IWU9 490 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 STK32AQ8WU08 396 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 JDP2Q8WYK2 163 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ART4Q93070 314 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 IQCDQ96DY2 449 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 CYTH2Q99418 400 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ZSWIM1Q9BR11 485 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 NSRP1Q9H0G5 558 aaKnown RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 ZNF395Q9H8N7 513 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-204ENST00000372246 BATF3Q9NR55 127 aa5.78□□□□□ -1.48
ATG4A-204ENST00000372246 BCL9O00512 1426 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 LRP5O75197 1615 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ABCB11O95342 1321 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 LOC102724428A0A0B4J2F2 783 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 A0A1W2PRG0 241 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 BTNL10A8MVZ5 291 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CES2O00748 559 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 PPEF1O14829 653 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ATP9AO75110 1047 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SORBS2O94875 1100 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CYP3A4P08684 503 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 TMEM253P0C7T8 217 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 BMP3P12645 472 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 RARGP13631 454 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 AMPD1P23109 780 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ADCY8P40145 1251 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 PPP1R2P41236 205 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CD151P48509 253 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 FMO5P49326 533 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 MARSP56192 900 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SIK1P57059 783 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 PPP3CAQ08209 521 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 PDIA5Q14554 519 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SMAD1Q15797 465 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 KAZNQ674X7 775 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CWF19L1Q69YN2 538 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SCARA3Q6AZY7 606 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 VPS36Q86VN1 386 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SLC13A5Q86YT5 568 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ANKMY2Q8IV38 441 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ZFPM1Q8IX07 1006 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SYCE1Q8N0S2 351 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms