RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TRIM15Q9C019 465 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 CNOT8Q9UFF9 292 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 PRKCEQ02156 737 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 BBS9Q3SYG4 887 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 PPP6R3Q5H9R7 873 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 MRPS26Q9BYN8 205 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 TADA2AO75478 443 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 PMS2P54278 862 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 LLGL1Q15334 1064 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 TEKT2Q9UIF3 430 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 ZFP69BQ9UJL9 534 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 STAP1Q9ULZ2 295 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 SNX24Q9Y343 169 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 RRN3P2A6NIE6 340 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 RGL2O15211 777 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 IL1R1P14778 569 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 ENOSF1Q7L5Y1 443 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 NOP9Q86U38 636 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 SRRM1Q8IYB3 904 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 CCDC124Q96CT7 223 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 UPP2O95045 317 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 KRT6AP02538 564 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 KRT6BP04259 564 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 KRT6CP48668 564 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 PSMC1P62191 440 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 NAA30Q147X3 362 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 CEP19Q96LK0 163 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 CTIFO43310 598 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 PCGF5Q86SE9 256 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 TAAR1Q96RJ0 339 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 CYTH2Q99418 400 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 FAM129AQ9BZQ8 928 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 TRIM39Q9HCM9 518 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 KCND2Q9NZV8 630 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 GSTA4O15217 222 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 NNMTP40261 264 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 TMEM62Q0P6H9 643 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 DRP2Q13474 957 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 MCUQ8NE86 351 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 TNIP3Q96KP6 325 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 UPF3AQ9H1J1 476 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 ZCCHC17Q9NP64 241 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 SAYSD1Q9NPB0 183 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 KRT82Q9NSB4 513 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 ANAPC7Q9UJX3 599 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 A0A0G2JND7 137 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 HBP1O60381 514 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 RALAP11233 206 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 CYP2C9P11712 490 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 PPARGP37231 505 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 TRIM62Q9BVG3 475 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 RHBDL2Q9NX52 303 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 MAD2L2Q9UI95 211 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 VWDEQ8N2E2 1590 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 PXDNQ92626 1479 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 TJP3O95049 919 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 ZNF280DQ6N043 979 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 SLC30A9Q6PML9 568 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 NLRP9Q7RTR0 991 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 SPATA2LQ8IUW3 424 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 RIT2Q99578 217 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 FAM96AQ9H5X1 160 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 KIF1AQ12756 1690 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 RASA4BC9J798 803 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 CFLARO15519 480 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 RASA4O43374 803 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 GPC5P78333 572 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 DCLK2Q8N568 766 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 GPRASP2Q96D09 838 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 GLT1D1Q96MS3 346 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 TTC25Q96NG3 672 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 RTFDC1Q9BY42 306 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 MROH8Q9H579 483 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 ECT2Q9H8V3 914 aa14.06□□□□□ -0.16
RAPGEF1-201ENST00000372189 SDC4P31431 198 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 NFIAQ12857 509 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 GPC2Q8N158 579 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 COG1Q8WTW3 980 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 C17orf102A2RUQ5 167 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 KRT37O76014 449 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 ITGA4P13612 1032 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 ANTXR2P58335 489 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 EFCAB12Q6NXP0 572 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 EMSYQ7Z589 1322 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 RPS6P62753 249 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 ACTN3Q08043 901 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 NBPF12Q5TAG4 269 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 SPOPLQ6IQ16 392 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 QKIQ96PU8 341 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 KLC4Q9NSK0 619 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 PPARGC1AQ9UBK2 798 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms