RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 NOC2LQ9Y3T9 749 aaKnown RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 FAM187AA6NFU0 413 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 F8VZ95 297 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 CETN3O15182 167 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 ZNF286BP0CG31 522 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 CST5P28325 142 aaPredicted RBP12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 NKX3-2P78367 333 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 KRT76Q01546 638 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 LMNB2Q03252 620 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 TRMT1LQ7Z2T5 733 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 METTL13Q8N6R0 699 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 UBLCP1Q8WVY7 318 aaPredicted RBP12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 PAWRQ96IZ0 340 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 NAGPAQ9UK23 515 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 NOVA2Q9UNW9 492 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 PCDHA2Q9Y5H9 948 aa12.3□□□□□ -0.44
TSPAN1-201ENST00000372003 FRMD3A2A2Y4 597 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 CCT8L1PA6NM43 557 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 WDR64B1ANS9 1081 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 EML1O00423 815 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 KRIT1O00522 736 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 BACH1O14867 736 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 H2AFZP0C0S5 128 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 SLC8A3P57103 927 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PSMC6P62333 389 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 ZNF746Q6NUN9 644 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 SWSAP1Q6NVH7 229 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 DPY19L2P1Q6NXN4 242 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 MIS18BP1Q6P0N0 1132 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 H2AFVQ71UI9 128 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 MIER3Q7Z3K6 550 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PEX26Q7Z412 305 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 CPLX4Q7Z7G2 160 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 CCDC197Q8NCU1 140 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 GLG1Q92896 1179 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 HES6Q96HZ4 224 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 KCTD10Q9H3F6 313 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 METTL14Q9HCE5 456 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 SUFUQ9UMX1 484 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 TRAF3IP3Q9Y228 551 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 BRCA2P51587 3418 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 A0A1B0GUA9 196 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 GTPBP10A4D1E9 387 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 POTEMA6NI47 508 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 CCDC169A6NNP5 214 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 CLGNO14967 610 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 KPNA6O60684 536 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 CAPN15O75808 1086 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 LGALS2P05162 132 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PSAPP07602 524 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 MARK3P27448 753 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 KCNH2Q12809 1159 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PPP2R5CQ13362 524 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 TRADDQ15628 312 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 KRT71Q3SY84 523 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 ABHD15Q6UXT9 468 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 ANKLE1Q8NAG6 615 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 MIEF2Q96C03 454 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 GLT1D1Q96MS3 346 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 C16orf70Q9BSU1 422 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PACSIN1Q9BY11 444 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 STMN4Q9H169 189 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 AZI2Q9H6S1 392 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 GABBR1Q9UBS5 961 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 CNOT8Q9UFF9 292 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 TPX2Q9ULW0 747 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PACSIN2Q9UNF0 486 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PHF24Q9UPV7 400 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 PCDHA10Q9Y5I2 948 aa12.29□□□□□ -0.44
TSPAN1-201ENST00000372003 H3BRB1 525 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 SLC16A3O15427 465 aaKnown RBP12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 ATG7O95352 703 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 AFPP02771 609 aaKnown RBP12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 SUPT20HL2P0C7V6 817 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 FERP16591 822 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 SFNP31947 248 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 STAT5BP51692 787 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 JAK3P52333 1124 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 MAGOHP61326 146 aaKnown RBP12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 PTK2Q05397 1052 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 SPIRE1Q08AE8 756 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 ADAM9Q13443 819 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 DHX34Q14147 1143 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms