RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 ADSSL1Q8N142 457 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 KLHL23Q8NBE8 558 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 XXYLT1Q8NBI6 393 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 TMEM174Q8WUU8 243 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 FAM212AQ96EL1 285 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 ZMAT2Q96NC0 199 aaKnown RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 TSPAN18Q96SJ8 248 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 PRDM12Q9H4Q4 367 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 RBAKQ9NYW8 714 aaPredicted RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 SPG21Q9NZD8 308 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 TRIP11Q15643 1979 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 EPOPA6NHQ4 379 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 ZNF233A6NK53 670 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 H3BNC9 293 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 IL18RAPO95256 599 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 NR3C1P04150 777 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 OR1G1P47890 313 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 GPM6BQ13491 265 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 MYBPC2Q14324 1141 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 SLC9A9Q8IVB4 645 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 BRSK2Q8IWQ3 736 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 FBXL18Q96ME1 805 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 ASB7Q9H672 318 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 FAN1Q9Y2M0 1017 aa17.3■□□□□ 0.36
PFDN4-201ENST00000371419 TRANK1O15050 2925 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 NT5C1B-RDH14C9J2C7 533 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 RFXAPO00287 272 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 NRP1O14786 923 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 PSMA7O14818 248 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 EXOC3O60645 756 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 FGF18O76093 207 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 SPAG1Q07617 926 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 SNRNP35Q16560 246 aaKnown RBP17.29■□□□□ 0.36
PFDN4-201ENST00000371419 NFIL3Q16649 462 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 ZCWPW2Q504Y3 356 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 CENPPQ6IPU0 288 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 SLC39A11Q8N1S5 342 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 RNF214Q8ND24 703 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 GDPD5Q8WTR4 605 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 KIF12Q96FN5 646 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 DHTKD1Q96HY7 919 aaPredicted RBP17.29■□□□□ 0.36
PFDN4-201ENST00000371419 DMAC2Q9NW81 257 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 DERAQ9Y315 318 aa17.29■□□□□ 0.36
PFDN4-201ENST00000371419 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.29■□□□□ 0.36
PFDN4-201ENST00000371419 CASTOR2A6NHX0 329 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 PPP1R3GB7ZBB8 358 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 ITGB1P05556 798 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 CD44P16070 742 aaKnown RBP17.28■□□□□ 0.36
PFDN4-201ENST00000371419 RPL13P26373 211 aaKnown RBP17.28■□□□□ 0.36
PFDN4-201ENST00000371419 PLCB3Q01970 1234 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 TYRO3Q06418 890 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 EDRF1Q3B7T1 1238 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 JADE1Q6IE81 842 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 RDH13Q8NBN7 331 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 TMEM169Q96HH4 297 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 IGSF21Q96ID5 467 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 UROC1Q96N76 676 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 TSG101Q99816 390 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 COLEC11Q9BWP8 271 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 MTMR10Q9NXD2 777 aa17.28■□□□□ 0.36
PFDN4-201ENST00000371419 PRG3Q9Y2Y8 225 aaPredicted RBP17.28■□□□□ 0.36
PFDN4-201ENST00000371419 XPOTO43592 962 aaKnown RBP17.27■□□□□ 0.36
PFDN4-201ENST00000371419 CYP3A5P20815 502 aa17.27■□□□□ 0.36
PFDN4-201ENST00000371419 NR2F2P24468 414 aa17.27■□□□□ 0.36
PFDN4-201ENST00000371419 KRT17Q04695 432 aa17.27■□□□□ 0.36
PFDN4-201ENST00000371419 SOX4Q06945 474 aaPredicted RBP17.27■□□□□ 0.36
PFDN4-201ENST00000371419 TMEM132DQ14C87 1099 aa17.27■□□□□ 0.36
PFDN4-201ENST00000371419 TMEM173Q86WV6 379 aaPredicted RBP17.27■□□□□ 0.36
PFDN4-201ENST00000371419 SPPL3Q8TCT6 385 aa17.27■□□□□ 0.36
PFDN4-201ENST00000371419 C18orf25Q96B23 403 aaPredicted RBP17.27■□□□□ 0.36
PFDN4-201ENST00000371419 DDX27Q96GQ7 796 aaKnown RBP17.27■□□□□ 0.36
PFDN4-201ENST00000371419 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
PFDN4-201ENST00000371419 UBQLN1Q9UMX0 589 aaKnown RBP17.27■□□□□ 0.36
PFDN4-201ENST00000371419 C2CD2Q9Y426 696 aa17.27■□□□□ 0.36
PFDN4-201ENST00000371419 TULP1O00294 542 aaPredicted RBP17.26■□□□□ 0.35
PFDN4-201ENST00000371419 GRM6O15303 877 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 LPXNO60711 386 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 NFICP08651 508 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 CCNE1P24864 410 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 UBE3AQ05086 875 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 SURF1Q15526 300 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 KLHL10Q6JEL2 608 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 NT5DC4Q86YG4 428 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 TRIM44Q96DX7 344 aaPredicted RBP17.26■□□□□ 0.35
PFDN4-201ENST00000371419 GUCD1Q96NT3 240 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 GAS2L1Q99501 681 aaPredicted RBP17.26■□□□□ 0.35
PFDN4-201ENST00000371419 CDX2Q99626 313 aaPredicted RBP17.26■□□□□ 0.35
PFDN4-201ENST00000371419 PAAF1Q9BRP4 392 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 LMAN2LQ9H0V9 348 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 GOLGA2P5Q9HBQ8 144 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 PDE11AQ9HCR9 933 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 CACNG4Q9UBN1 327 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 TUBGCP4Q9UGJ1 667 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
PFDN4-201ENST00000371419 LZTS1Q9Y250 596 aa17.26■□□□□ 0.35
PFDN4-201ENST00000371419 FRMD4BQ9Y2L6 1034 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms