RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
PHGDH-201ENST00000369407 MUM1Q2TAK8 710 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 KHDC1Q4VXA5 237 aaKnown RBP13.09□□□□□ -0.31
PHGDH-201ENST00000369407 SLC30A9Q6PML9 568 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 DTX3LQ8TDB6 740 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 TEKT4Q8WW24 435 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 KREMEN1Q96MU8 473 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 NARFQ9UHQ1 456 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 MAST2Q6P0Q8 1798 aa13.08□□□□□ -0.31
PHGDH-201ENST00000369407 LRRD1A4D1F6 860 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 ZSCAN5DPP0CG00 497 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 GAP43P17677 238 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 FMO1Q01740 532 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 LAMB3Q13751 1172 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 CRYGNQ8WXF5 182 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 UBN1Q9NPG3 1134 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 NOCTQ9UK39 431 aaKnown RBP13.08□□□□□ -0.32
PHGDH-201ENST00000369407 EXOC1LA0A1B0GW35 172 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 K7ENM7 598 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 CDH16O75309 829 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 BANF1O75531 89 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 SLC1A5Q15758 541 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 IZUMO3Q5VZ72 239 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
PHGDH-201ENST00000369407 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 TAB3Q8N5C8 712 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-201ENST00000369407 GLIS1Q8NBF1 620 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 WDR18Q9BV38 432 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
PHGDH-201ENST00000369407 DMAC2Q9NW81 257 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 RPS6KL1Q9Y6S9 549 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 MAPK13O15264 365 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 RALAP11233 206 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 RAB27AP51159 221 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 VAMP7P51809 220 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 CCNG1P51959 295 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 HADHBP55084 474 aaKnown RBP13.08□□□□□ -0.32
PHGDH-201ENST00000369407 RASA3Q14644 834 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 Q4G0T1 1027 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 HSD17B14Q9BPX1 270 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 SAYSD1Q9NPB0 183 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 LRRC4BQ9NT99 713 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 C2CD2Q9Y426 696 aa13.08□□□□□ -0.32
PHGDH-201ENST00000369407 EIF3DO15371 548 aaKnown RBP eCLIP13.07□□□□□ -0.32
PHGDH-201ENST00000369407 NEFHP12036 1026 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ETS1P14921 441 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ATP6V1C1P21283 382 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 CA4P22748 312 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ICA1Q05084 483 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 FAM182AQ5T1J6 154 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 DSTYKQ6XUX3 929 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 PPP1R21Q6ZMI0 780 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 B4GALNT2Q8NHY0 566 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 SEMA4DQ92854 862 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 RBM15Q96T37 977 aaKnown RBP eCLIP13.07□□□□□ -0.32
PHGDH-201ENST00000369407 MKNK1Q9BUB5 465 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 USTQ9Y2C2 406 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 USH1CQ9Y6N9 552 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 FSCN2O14926 492 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 GDF11O95390 407 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ASMTLO95671 621 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 CFBP00751 764 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 MAPK4P31152 587 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 PAPOLAP51003 745 aaKnown RBP13.07□□□□□ -0.32
PHGDH-201ENST00000369407 POLE2P56282 527 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
PHGDH-201ENST00000369407 CCDC6Q16204 474 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 CPA5Q8WXQ8 436 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
PHGDH-201ENST00000369407 KLF6Q99612 283 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-201ENST00000369407 MIPEPQ99797 713 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 TRAIPQ9BWF2 469 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 TRABDQ9H4I3 376 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 TOPORSQ9NS56 1045 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-201ENST00000369407 GGA1Q9UJY5 639 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
PHGDH-201ENST00000369407 ADGRA3Q8IWK6 1321 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 GOLGA8RI6L899 631 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 GAS8O95995 478 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 C1orf220Q5T0J3 134 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 KAZNQ674X7 775 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 OTOP1Q7RTM1 612 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms