RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 C17orf80Q9BSJ5 609 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 GMNCA6NCL1 334 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 IGKV5-2P06315 115 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 C6orf222P0C671 652 aaPredicted RBP19.13■□□□□ 0.65
SNX27-202ENST00000368841 PNMA8BQ9ULN7 279 aaPredicted RBP19.13■□□□□ 0.65
SNX27-202ENST00000368841 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 RSPH10B2B2RC85 870 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 RSPH10BP0C881 870 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 EPC2Q52LR7 807 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 DGKHQ86XP1 1220 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 C4orf33Q8N1A6 199 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 C6orf203Q9P0P8 240 aaPredicted RBP19.13■□□□□ 0.65
SNX27-202ENST00000368841 PCDHGB4Q9UN71 923 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 PKP3Q9Y446 797 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 CCDC188H7C350 402 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 KRT7P08729 469 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 SCP2P22307 547 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 SCARF1Q14162 830 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 FBXO40Q9UH90 709 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 ATP8B1O43520 1251 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 OR1G1P47890 313 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 DUOXA2Q1HG44 320 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 EMBQ6PCB8 327 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 LAYNQ6UX15 382 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 MIER2Q8N344 545 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 SLC35G2Q8TBE7 412 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 INPP5DQ92835 1189 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 WNT8AQ9H1J5 351 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 ATP7BP35670 1465 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 C5orf58C9J3I9 102 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 HOXD10P28358 340 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 ZNF157P51786 506 aaPredicted RBP19.12■□□□□ 0.65
SNX27-202ENST00000368841 ZC2HC1CQ53FD0 456 aaPredicted RBP19.12■□□□□ 0.65
SNX27-202ENST00000368841 HAUS6Q7Z4H7 955 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 GALNT4Q8N4A0 578 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 SRBD1Q8N5C6 995 aaKnown RBP19.12■□□□□ 0.65
SNX27-202ENST00000368841 ATPAF2Q8N5M1 289 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 MTBPQ96DY7 904 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 SELENONQ9NZV5 590 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 SYNMO15061 1565 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 CCDC159P0C7I6 412 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 OR2W6PQ8NHA6 318 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 KLF6Q99612 283 aaPredicted RBP19.12■□□□□ 0.65
SNX27-202ENST00000368841 CARSP49589 748 aaKnown RBP19.12■□□□□ 0.65
SNX27-202ENST00000368841 SLC7A14Q8TBB6 771 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 KDM4CQ9H3R0 1056 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 EXOC4Q96A65 974 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 CYBBP04839 570 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 HSPA1AP0DMV8 641 aaKnown RBP19.12■□□□□ 0.65
SNX27-202ENST00000368841 HSPA1BP0DMV9 641 aaKnown RBP19.12■□□□□ 0.65
SNX27-202ENST00000368841 SFNP31947 248 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 KCNJ6P48051 423 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 SEZ6Q53EL9 994 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 NDE1Q9NXR1 346 aa19.12■□□□□ 0.65
SNX27-202ENST00000368841 CDR2LQ86X02 465 aaPredicted RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 FAM136AQ96C01 138 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 ZSCAN32Q9NX65 697 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 CACNA2D2Q9NY47 1150 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 CYP27B1O15528 508 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 AKAP10O43572 662 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 WBP4O75554 376 aaKnown RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 PBLDP30039 288 aaPredicted RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 C6orf10Q5SRN2 563 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 DDX28Q9NUL7 540 aaKnown RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 ZFATQ9P243 1243 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 ZNF711Q9Y462 761 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 MAGEB10Q96LZ2 347 aaPredicted RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 TASP1Q9H6P5 420 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 KLK14Q9P0G3 267 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 LIMA1Q9UHB6 759 aaKnown RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 ANGPT2O15123 496 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 WEE2P0C1S8 567 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 STAT5BP51692 787 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 TRIM60Q495X7 471 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 SHC4Q6S5L8 630 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 MMS22LQ6ZRQ5 1243 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 TAF1DQ9H5J8 278 aaPredicted RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 PRR36Q9H6K5 1346 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 MIF4GDA9UHW6 222 aaKnown RBP19.11■□□□□ 0.65
SNX27-202ENST00000368841 ASAP2O43150 1006 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 FUT11Q495W5 492 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 FAM162AQ96A26 154 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 LRRC1Q9BTT6 524 aa19.11■□□□□ 0.65
SNX27-202ENST00000368841 EEF2KO00418 725 aaKnown RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 PPP1R18Q6NYC8 613 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 PROM2Q8N271 834 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 SH2D3CQ8N5H7 860 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 IPMKQ8NFU5 416 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 DNAJC7Q99615 494 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 IMPDH2P12268 514 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 ST8SIA6P61647 398 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 ZNF512Q96ME7 567 aaPredicted RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 ARHGEF38Q9NXL2 777 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 BFARQ9NZS9 450 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 MRPL42Q9Y6G3 142 aaKnown RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 KDM5CP41229 1560 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 LVRNQ6Q4G3 990 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 C20orf96Q9NUD7 363 aaPredicted RBP19.1■□□□□ 0.65
SNX27-202ENST00000368841 GJB7Q6PEY0 223 aa19.1■□□□□ 0.65
SNX27-202ENST00000368841 DPF2Q92785 391 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms