RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 NFIAQ12857 509 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 ARHGAP44Q17R89 818 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 OGFOD1Q8N543 542 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 BBOF1Q8ND07 529 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 SLC20A1Q8WUM9 679 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 ERP27Q96DN0 273 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 NUDCD1Q96RS6 583 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 BHMT2Q9H2M3 363 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 MLXIPLQ9NP71 852 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 PAPOLBQ9NRJ5 636 aaKnown RBP18.57■□□□□ 0.56
CHTOP-203ENST00000368690 NINJ2Q9NZG7 142 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 UVRAGQ9P2Y5 699 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 NAALADL1Q9UQQ1 740 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 USP20Q9Y2K6 914 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 FAM13AO94988 1023 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 ABHD2P08910 425 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 GCLCP48506 637 aaPredicted RBP18.57■□□□□ 0.56
CHTOP-203ENST00000368690 RINT1Q6NUQ1 792 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 PSPC1Q8WXF1 523 aaKnown RBP18.57■□□□□ 0.56
CHTOP-203ENST00000368690 ASIC3Q9UHC3 531 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 CHKBQ9Y259 395 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L15C9J2P7 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L13C9JLJ4 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L11C9JVI0 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L18D6R9N7 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L22D6RA61 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L17D6RBQ6 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L19D6RCP7 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L20D6RJB6 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 SPOPO43791 374 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 RAB27AP51159 221 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 MXRA7P84157 204 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L24Q0WX57 530 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 THEMIS2Q5TEJ8 643 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 TRIM68Q6AZZ1 485 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 TTBK2Q6IQ55 1244 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 IRGCQ6NXR0 463 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 RPUSD2Q8IZ73 545 aaKnown RBP18.56■□□□□ 0.56
CHTOP-203ENST00000368690 CYP4X1Q8N118 509 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 GALNT15Q8N3T1 639 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 RBBP8NLQ8NC74 664 aaPredicted RBP18.56■□□□□ 0.56
CHTOP-203ENST00000368690 LENG9Q96B70 501 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 SLC7A6OSQ96CW6 309 aaPredicted RBP18.56■□□□□ 0.56
CHTOP-203ENST00000368690 FOXP3Q9BZS1 431 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 DCLRE1BQ9H816 532 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 ZNF646O15015 1829 aaPredicted RBP18.56■□□□□ 0.56
CHTOP-203ENST00000368690 FER1L6Q2WGJ9 1857 aa18.56■□□□□ 0.56
CHTOP-203ENST00000368690 PRPF4O43172 522 aaKnown RBP eCLIP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 ASMTLO95671 621 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 GAS8O95995 478 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 AKR1B1P15121 316 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 MUTP22033 750 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 BFSP1Q12934 665 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 TRAF1Q13077 416 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 KYNUQ16719 465 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 SGO2Q562F6 1265 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 PRR16Q569H4 304 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 ILDR2Q71H61 639 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 DNAJC9Q8WXX5 260 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 TBC1D10AQ9BXI6 508 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 FHDC1Q9C0D6 1143 aaPredicted RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 VCXQ9H320 206 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 TDRD3Q9H7E2 651 aaKnown RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 AGPAT3Q9NRZ7 376 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 LNPEPQ9UIQ6 1025 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 ZMYND8Q9ULU4 1186 aaPredicted RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 GREB1LQ9C091 1923 aaPredicted RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 SMIM24O75264 130 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 VIL1P09327 827 aaKnown RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 GM2AP17900 193 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 BRD2P25440 801 aaKnown RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 CIITAP33076 1130 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 ITGA8P53708 1063 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 WDR4P57081 412 aaKnown RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 CXCL9Q07325 125 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 SRRM1Q8IYB3 904 aaKnown RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 ZNF564Q8TBZ8 553 aaPredicted RBP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 RNF217Q8TC41 542 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 PARVGQ9HBI0 331 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 SAR1AQ9NR31 198 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 GTF3C4Q9UKN8 822 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 VAV3Q9UKW4 847 aa18.55■□□□□ 0.56
CHTOP-203ENST00000368690 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.55■□□□□ 0.56
CHTOP-203ENST00000368690 T-ENOLP0DO92 83 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 PTDSS1P48651 473 aaKnown RBP18.54■□□□□ 0.56
CHTOP-203ENST00000368690 CETN1Q12798 172 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 C1orf186Q6ZWK4 172 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 LONP2Q86WA8 852 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 MYCT1Q8N699 235 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 ZNF398Q8TD17 642 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 DENND1AQ8TEH3 1009 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 TMEM174Q8WUU8 243 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 MAML1Q92585 1016 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 MRIQ9BWK5 157 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 ANAPC5Q9UJX4 755 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 PHTF1Q9UMS5 762 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 MEIS2O14770 477 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 LRRN2O75325 713 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 FOSP01100 380 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms