RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 COPS5Q92905 334 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 PTPRJQ12913 1337 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 ZNFX1Q9P2E3 1918 aaKnown RBP18.74■□□□□ 0.59
LMNA-205ENST00000368299 OGTO15294 1046 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 MCL1Q07820 350 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 PAK2Q13177 524 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 CUL2Q13617 745 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 PPP2R5EQ16537 467 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 GPR162Q16538 588 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 ZSCAN26Q16670 478 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 CLEC16AQ2KHT3 1053 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 ZBTB41Q5SVQ8 909 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 ZNF467Q7Z7K2 595 aaPredicted RBP18.74■□□□□ 0.59
LMNA-205ENST00000368299 GSPT2Q8IYD1 628 aaKnown RBP18.74■□□□□ 0.59
LMNA-205ENST00000368299 LRRC71Q8N4P6 559 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 CAVIN3Q969G5 261 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 MS4A4AQ96JQ5 239 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 IMPG2Q9BZV3 1241 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 PDGFCQ9NRA1 345 aa18.74■□□□□ 0.59
LMNA-205ENST00000368299 FAM189A1O60320 539 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 PHACTR2O75167 634 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 GUCY2DQ02846 1103 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 ZNF484Q5JVG2 852 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 SMYD5Q6GMV2 418 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 RHPN2Q8IUC4 686 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 CCDC102AQ96A19 550 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 ZNF653Q96CK0 615 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 SLITRK6Q9H5Y7 841 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 ZNF408Q9H9D4 720 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 EPB41L5Q9HCM4 733 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 MORF4L1Q9UBU8 362 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 IVNS1ABPQ9Y6Y0 642 aa18.73■□□□□ 0.59
LMNA-205ENST00000368299 RAD51CO43502 376 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 CLSTN1O94985 981 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 ADORA2AP29274 412 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 MRPS25P82663 173 aaKnown RBP18.72■□□□□ 0.59
LMNA-205ENST00000368299 TSHZ1Q6ZSZ6 1077 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 ANKRD23Q86SG2 305 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 KLHL7Q8IXQ5 586 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 ZNF564Q8TBZ8 553 aaPredicted RBP18.72■□□□□ 0.59
LMNA-205ENST00000368299 TRIM11Q96F44 468 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 FAN1Q9Y2M0 1017 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 CCL15-CCL14A0A0B4J2E2 113 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 RBM47A0AV96 593 aaKnown RBP18.72■□□□□ 0.59
LMNA-205ENST00000368299 TULP2O00295 520 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 ACKR2O00590 384 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 GH1P01241 217 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 CLTAP09496 248 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 HARSP12081 509 aaKnown RBP18.72■□□□□ 0.59
LMNA-205ENST00000368299 ARHGAP1Q07960 439 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 NCOA4Q13772 614 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 CCL15Q16663 113 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 SND1Q7KZF4 910 aaKnown RBP eCLIP18.72■□□□□ 0.591e-8■■□□□ 12.8
LMNA-205ENST00000368299 EMID1Q96A84 441 aaPredicted RBP18.72■□□□□ 0.59
LMNA-205ENST00000368299 NUP85Q9BW27 656 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 NFKBIZQ9BYH8 718 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 WNT8AQ9H1J5 351 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 FZD8Q9H461 694 aa18.72■□□□□ 0.59
LMNA-205ENST00000368299 BTBD19C9JJ37 291 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 SART1O43290 800 aaKnown RBP18.71■□□□□ 0.59
LMNA-205ENST00000368299 FGGP02679 453 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 MYBL1P10243 752 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 UNGP13051 313 aaPredicted RBP18.71■□□□□ 0.59
LMNA-205ENST00000368299 ACO1P21399 889 aaKnown RBP18.71■□□□□ 0.59
LMNA-205ENST00000368299 NOP14P78316 857 aaKnown RBP18.71■□□□□ 0.59
LMNA-205ENST00000368299 POU5F1BQ06416 359 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 EFCAB12Q6NXP0 572 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 PPP1R2P3Q6NXS1 205 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 TAPT1Q6NXT6 567 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 TRIM72Q6ZMU5 477 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 MAATS1Q7Z4T9 603 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 CCDC26Q8TAB7 109 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 RNPC3Q96LT9 517 aaKnown RBP18.71■□□□□ 0.59
LMNA-205ENST00000368299 HINFPQ9BQA5 517 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 AP1M1Q9BXS5 423 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 CNTN6Q9UQ52 1028 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 MCM3APO60318 1980 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 GOLGA6L10A0A0M3HER8 536 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 PROZP22891 400 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 ACTN2P35609 894 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 MPZL3Q6UWV2 235 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 ZBTB33Q86T24 672 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 OR5B17Q8NGF7 314 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 PPTC7Q8NI37 304 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 FAM84AQ96KN4 292 aa18.71■□□□□ 0.59
LMNA-205ENST00000368299 CPSF3Q9UKF6 684 aaKnown RBP18.71■□□□□ 0.59
LMNA-205ENST00000368299 TTLL13PA6NNM8 815 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 ABLIM1O14639 778 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 MAGEB2O15479 319 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 HSPA6P17066 643 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 PTENP60484 403 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 CUL1Q13616 776 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 MESDQ14696 234 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 DCAF12L1Q5VU92 463 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 MAP1SQ66K74 1059 aaPredicted RBP18.7■□□□□ 0.58
LMNA-205ENST00000368299 SPOPLQ6IQ16 392 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 ELMO3Q96BJ8 720 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 GDAP1L1Q96MZ0 367 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 ZSWIM1Q9BR11 485 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms