RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CDKL3Q8IVW4 592 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 HVCN1Q96D96 273 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 TAF1DQ9H5J8 278 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 NECAB2Q7Z6G3 386 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 CD302Q8IX05 232 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 PYROXD1Q8WU10 500 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 APBA2Q99767 749 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 TINF2Q9BSI4 451 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 MRPL9Q9BYD2 267 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 TRIM9Q9C026 710 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 DDX56Q9NY93 547 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.591e-12■■■□□ 17.4
PTPRK-205ENST00000368213 NDUFAB1O14561 156 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 AMHR2Q16671 573 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 GOLGA7BQ2TAP0 167 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 CENPUQ71F23 418 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 VSTM4Q8IW00 320 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 PRR23AA6NEV1 266 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 YWHAHQ04917 246 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 PGM5Q15124 567 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 TRIM67Q6ZTA4 783 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 CATSPER3Q86XQ3 398 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 KCTD17Q8N5Z5 321 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 RBBP8NLQ8NC74 664 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 SCG3Q8WXD2 468 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 TSR3Q9UJK0 312 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 PPME1Q9Y570 386 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 UBA6A0AVT1 1052 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 H0Y626 953 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 HLA-DRAP01903 254 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 MT-ND3P03897 115 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 CDC25BP30305 580 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 NAMPTP43490 491 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 DEUP1Q05D60 604 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 MAP2K5Q13163 448 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 ANKRD40Q6AI12 368 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 ADGRA1Q86SQ6 560 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 ITIH5Q86UX2 942 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 SLC7A14Q8TBB6 771 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 DSEQ9UL01 958 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 A0A087WZ62 844 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 MIF4GDA9UHW6 222 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 IFNAR2P48551 515 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 KPNA1P52294 538 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 SEMA3FQ13275 785 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 SLC30A10Q6XR72 485 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 SZRD1Q7Z422 152 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 CEP120Q8N960 986 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 OR6P1Q8NGX9 317 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 CALR3Q96L12 384 aaKnown RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 FDXACB1Q9BRP7 624 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-205ENST00000368213 NUF2Q9BZD4 464 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 SLC13A4Q9UKG4 626 aa11.38□□□□□ -0.59
PTPRK-205ENST00000368213 WEE2P0C1S8 567 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 TAC1P20366 129 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 SLC11A2P49281 568 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 SNRPFP62306 86 aaKnown RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 TMED2Q15363 201 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 ANO4Q32M45 955 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 MPZL3Q6UWV2 235 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 LRRC8CQ8TDW0 803 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 ASAP3Q8TDY4 903 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 SNX19Q92543 992 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 FBXO32Q969P5 355 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 PABPC5Q96DU9 382 aaKnown RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 TRPM5Q9NZQ8 1165 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 BCAP29Q9UHQ4 241 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 FBXO2Q9UK22 296 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 CASTOR2A6NHX0 329 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 CYB561D2O14569 222 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 APOL1O14791 398 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 PDGFRAP16234 1089 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 SREBF1P36956 1147 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 SYTL3Q4VX76 610 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 SH2D4BQ5SQS7 431 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 ATPAF2Q8N5M1 289 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 SLC4A9Q96Q91 983 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 YIPF2Q9BWQ6 316 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 TRIM54Q9BYV2 358 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 AGO4Q9HCK5 861 aaKnown RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 TBX20Q9UMR3 447 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 RNASEH1O60930 286 aaKnown RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 POMCP01189 267 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 NOP14P78316 857 aaKnown RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 KDELC2Q7Z4H8 507 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 GPR142Q7Z601 462 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 ATP8B4Q8TF62 1192 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 EGFL8Q99944 293 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 CYP4F11Q9HBI6 524 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 THG1LQ9NWX6 298 aaKnown RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 WDR35Q9P2L0 1181 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 GOLGA8QA0A0J9YX86 632 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms