RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SLC10A6Q3KNW5 377 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 USP41Q3LFD5 358 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 KIAA0319Q5VV43 1072 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 SLFN12LQ6IEE8 588 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 PTCRAQ6ISU1 281 aaPredicted RBP10.76□□□□□ -0.69
CD48-202ENST00000368046 CNNM4Q6P4Q7 775 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 DCLRE1AQ6PJP8 1040 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 SFR1Q86XK3 245 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 RNF168Q8IYW5 571 aaPredicted RBP10.76□□□□□ -0.69
CD48-202ENST00000368046 AUTS2Q8WXX7 1259 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 HVCN1Q96D96 273 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 DDX27Q96GQ7 796 aaKnown RBP10.76□□□□□ -0.69
CD48-202ENST00000368046 UROC1Q96N76 676 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 KLHL5Q96PQ7 755 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 C7orf25Q9BPX7 421 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 PAAF1Q9BRP4 392 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 EMILIN2Q9BXX0 1053 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 GPR62Q9BZJ7 368 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 TRIM9Q9C026 710 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 MAGEF1Q9HAY2 307 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 SLC38A7Q9NVC3 462 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 ANKFY1Q9P2R3 1169 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 STYXL1Q9Y6J8 313 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 A0A0B4J269 797 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.75□□□□□ -0.69
CD48-202ENST00000368046 CASTOR2A6NHX0 329 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 ANKRD63C9JTQ0 380 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 F8W810 466 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 OGTO15294 1046 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 MBTPS2O43462 519 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 PPP1R37O75864 691 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 GLP2RO95838 553 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 SRGAP2BP0DMP2 458 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 HARSP12081 509 aaKnown RBP10.75□□□□□ -0.69
CD48-202ENST00000368046 HOXB8P17481 243 aaPredicted RBP10.75□□□□□ -0.69
CD48-202ENST00000368046 KLRC2P26717 231 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 CLCNKBP51801 687 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 DSG1Q02413 1049 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 COASYQ13057 564 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 ALCAMQ13740 583 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 POSTNQ15063 836 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 PTPN14Q15678 1187 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 SEZ6Q53EL9 994 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 GLRA4Q5JXX5 417 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 KIAA1841Q6NSI8 718 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 PPFIBP1Q86W92 1011 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 ADAMTS19Q8TE59 1207 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 RABGGTAQ92696 567 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 ZMAT2Q96NC0 199 aaKnown RBP10.75□□□□□ -0.69
CD48-202ENST00000368046 ACCSQ96QU6 501 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 TSPAN18Q96SJ8 248 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 UHRF1Q96T88 793 aaPredicted RBP10.75□□□□□ -0.69
CD48-202ENST00000368046 HERC2P3Q9BVR0 1158 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 RXFP1Q9HBX9 757 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 TBC1D7Q9P0N9 293 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 CNTN3Q9P232 1028 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 CD207Q9UJ71 328 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 EXOC7Q9UPT5 735 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 HCFC2Q9Y5Z7 792 aa10.75□□□□□ -0.69
CD48-202ENST00000368046 A0A1B0GVL5 298 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 TTC26A0AVF1 554 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 TRAPPC3O43617 180 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 TBX10O75333 385 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 B3GAT3O94766 335 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 GCNT3O95395 438 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 C1RP00736 705 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 URODP06132 367 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 ADRB2P07550 413 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 CNPP09543 421 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 SLFN14P0C7P3 912 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 IL9P15248 144 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 RPL9P32969 192 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 GLUD2P49448 558 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 RBM10P98175 930 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 POU5F1Q01860 360 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 KCNA1Q09470 495 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 ELAVL2Q12926 359 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 ZBTB6Q15916 424 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 UPP1Q16831 310 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 ANKRD54Q6NXT1 300 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 LLGL2Q6P1M3 1020 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 SLC39A4Q6P5W5 647 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 CD302Q8IX05 232 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 CEP57L1Q8IYX8 460 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 VN1R2Q8NFZ6 395 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 SLC22A17Q8WUG5 538 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 CASP10Q92851 521 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 CHAMP1Q96JM3 812 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 SNX27Q96L92 541 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 MSTO1Q9BUK6 570 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 S1PR5Q9H228 398 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 TMEM206Q9H813 350 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 RPF1Q9H9Y2 349 aaKnown RBP10.74□□□□□ -0.69
CD48-202ENST00000368046 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.74□□□□□ -0.69
CD48-202ENST00000368046 CACNG4Q9UBN1 327 aa10.74□□□□□ -0.69
CD48-202ENST00000368046 USP25Q9UHP3 1055 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms