RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SNX27Q96L92 541 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 TMEM175Q9BSA9 504 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 TRIM9Q9C026 710 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 TNMDQ9H2S6 317 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 KANSL3Q9P2N6 904 aa16.02■□□□□ 0.16
SF3B5-201ENST00000367569 MYO10Q9HD67 2058 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 H0YCG3 227 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 CLDN3O15551 220 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 ACTN4O43707 911 aaKnown RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 PRPF6O94906 941 aaKnown RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 KIF4AO95239 1232 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 GAP43P17677 238 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 SP100P23497 879 aaPredicted RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 YARSP54577 528 aaKnown RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 SOX4Q06945 474 aaPredicted RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 CUL4BQ13620 913 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 NAB2Q15742 525 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 TAS1R1Q7RTX1 841 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 APBB1IPQ7Z5R6 666 aaPredicted RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 DDX53Q86TM3 631 aaKnown RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 NOC3LQ8WTT2 800 aaKnown RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 PBXIP1Q96AQ6 731 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 ZMAT2Q96NC0 199 aaKnown RBP16.01■□□□□ 0.15
SF3B5-201ENST00000367569 KCNH6Q9H252 994 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 KBTBD4Q9NVX7 518 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
SF3B5-201ENST00000367569 FRMD3A2A2Y4 597 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 PPP1R37O75864 691 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 THP07101 528 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 PRR29P0C7W0 189 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 CTSAP10619 480 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 NDUFA8P51970 172 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 NUCB2P80303 420 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 GTF2BQ00403 316 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 NHLH1Q02575 133 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 MCL1Q07820 350 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 TUSC3Q13454 348 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 KANK3Q6NY19 840 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 ZNF720Q7Z2F6 126 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 CCDC65Q8IXS2 484 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 ZSWIM2Q8NEG5 633 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 C18orf25Q96B23 403 aaPredicted RBP16■□□□□ 0.15
SF3B5-201ENST00000367569 FAM212AQ96EL1 285 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 MSTO1Q9BUK6 570 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 ADAM7Q9H2U9 754 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 POMKQ9H5K3 350 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 TUBGCP4Q9UGJ1 667 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 IRAK3Q9Y616 596 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 ZMYM2Q9UBW7 1377 aa16■□□□□ 0.15
SF3B5-201ENST00000367569 TSC2P49815 1807 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 I3L4J1 428 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 PIGRP01833 764 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 ALDH2P05091 517 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 WEE2P0C1S8 567 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 EPCAMP16422 314 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 ANP32AP39687 249 aaKnown RBP15.99■□□□□ 0.15
SF3B5-201ENST00000367569 GUCY2FP51841 1108 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 SIGLEC14Q08ET2 396 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 HSP90AA2PQ14568 343 aaPredicted RBP15.99■□□□□ 0.15
SF3B5-201ENST00000367569 BMS1Q14692 1282 aaKnown RBP15.99■□□□□ 0.15
SF3B5-201ENST00000367569 PTPN14Q15678 1187 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 PTPN21Q16825 1174 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 IER5LQ5T953 404 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 ADALQ6DHV7 355 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 GLYCTKQ8IVS8 523 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 CEP57L1Q8IYX8 460 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 C12orf76Q8N812 135 aaPredicted RBP15.99■□□□□ 0.15
SF3B5-201ENST00000367569 SAAL1Q96ER3 474 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 FAM84AQ96KN4 292 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 ACAP3Q96P50 834 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 PPP1R10Q96QC0 940 aaKnown RBP15.99■□□□□ 0.15
SF3B5-201ENST00000367569 CUEDC2Q9H467 287 aa15.99■□□□□ 0.15
SF3B5-201ENST00000367569 SMIM28A0A1B0GU29 152 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 FAM189A1O60320 539 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 CMA1P23946 247 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 ACOT2P49753 483 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 CLCNKBP51801 687 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 ITIH3Q06033 890 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 SLC10A6Q3KNW5 377 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 RARS2Q5T160 578 aaKnown RBP15.98■□□□□ 0.15
SF3B5-201ENST00000367569 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
SF3B5-201ENST00000367569 CES5AQ6NT32 575 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 FUT10Q6P4F1 479 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 C3orf58Q8NDZ4 430 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 FEZF2Q8TBJ5 459 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 SLC22A17Q8WUG5 538 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 ASIC4Q96FT7 647 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 HERC2P3Q9BVR0 1158 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 GPR62Q9BZJ7 368 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 SCAND2PQ9GZW5 306 aaPredicted RBP15.98■□□□□ 0.15
SF3B5-201ENST00000367569 TSHZ2Q9NRE2 1034 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 TOPORSQ9NS56 1045 aaPredicted RBP15.98■□□□□ 0.15
SF3B5-201ENST00000367569 SEL1LQ9UBV2 794 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 KCNG1Q9UIX4 513 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 HPSEQ9Y251 543 aa15.98■□□□□ 0.15
SF3B5-201ENST00000367569 C2orf16Q68DN1 1984 aa15.97■□□□□ 0.15
SF3B5-201ENST00000367569 CARNS1A5YM72 827 aa15.97■□□□□ 0.15
SF3B5-201ENST00000367569 GOLGA8IPA6NC78 632 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms