RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 FOXP3Q9BZS1 431 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 PARVBQ9HBI1 364 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
SHPRH-202ENST00000367503 AP4S1Q9Y587 144 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 PSAPP07602 524 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 PRELPP51888 382 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 ANTXR2P58335 489 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
SHPRH-202ENST00000367503 CDKAL1Q5VV42 579 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 NBPF15Q8N660 670 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 INTS2Q9H0H0 1204 aaKnown RBP12.94□□□□□ -0.34
SHPRH-202ENST00000367503 GOLPH3Q9H4A6 298 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 GDF3Q9NR23 364 aa12.94□□□□□ -0.34
SHPRH-202ENST00000367503 H0Y626 953 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 TRIM16O95361 564 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 EIF2B2P49770 351 aaKnown RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 DMPKQ09013 629 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 DCTN2Q13561 401 aaKnown RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 PTPAQ15257 358 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 KIF19Q2TAC6 998 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 PATL1Q86TB9 770 aaKnown RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 CCNYQ8ND76 341 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 CEP95Q96GE4 821 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 NR1H4Q96RI1 486 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 VPS11Q9H270 941 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L15C9J2P7 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L13C9JLJ4 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L11C9JVI0 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L18D6R9N7 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L22D6RA61 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L17D6RBQ6 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L19D6RCP7 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L20D6RJB6 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L24Q0WX57 530 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 TBL3Q12788 808 aaKnown RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 MAPK7Q13164 816 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 PRKG1Q13976 671 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 OR6B2Q6IFH4 312 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 LRRC8EQ6NSJ5 796 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 C16orf89Q6UX73 402 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 CD302Q8IX05 232 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 MCPH1Q8NEM0 835 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 DACH2Q96NX9 599 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 FKBP6O75344 327 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 CCND2P30279 289 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 STX3Q13277 289 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 P3H1Q32P28 736 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 NANOGNBQ7Z5D8 188 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 RHOT1Q8IXI2 618 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 ZNF507Q8TCN5 953 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 ACTRT1Q8TDG2 376 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 METTL5Q9NRN9 209 aaKnown RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 TPD52L2O43399 206 aaKnown RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 SORBS3O60504 671 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 MYBL2P10244 700 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 MAGEA4P43358 317 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 JAK3P52333 1124 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 ITGB3BPQ13352 177 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 PADI6Q6TGC4 694 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 FBXL13Q8NEE6 735 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 EZH1Q92800 747 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-202ENST00000367503 BEGAINQ9BUH8 593 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 ZWILCHQ9H900 591 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 ABCF3Q9NUQ8 709 aa12.93□□□□□ -0.34
SHPRH-202ENST00000367503 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-202ENST00000367503 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 CLDN3O15551 220 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 CALB1P05937 261 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 RARGP13631 454 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 NUP107P57740 925 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 OVGP1Q12889 678 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 MTDHQ86UE4 582 aaKnown RBP12.92□□□□□ -0.34
SHPRH-202ENST00000367503 TMEM165Q9HC07 324 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 ATXN10Q9UBB4 475 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 NEU2Q9Y3R4 380 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 CD58P19256 250 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 ITGA8P53708 1063 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 FAM43BQ6ZT52 329 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-202ENST00000367503 ENOSF1Q7L5Y1 443 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 RHPN2Q8IUC4 686 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 AGPAT1Q99943 283 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 SLC38A10Q9HBR0 1119 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 COMMD3-BMI1R4GMX3 469 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 PSMA2P25787 234 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 PEX5P50542 639 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 VAMP7P51809 220 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 STK4Q13043 487 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 MTERF2Q49AM1 385 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 ACCSLQ4AC99 568 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 MFSD4BQ5TF39 518 aa12.92□□□□□ -0.34
SHPRH-202ENST00000367503 TRIM67Q6ZTA4 783 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms