RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 STAT5BP51692 787 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 RWDD4Q6NW29 188 aaKnown RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 KDM7AQ6ZMT4 941 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 ERP27Q96DN0 273 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 ROPN1BQ9BZX4 212 aaPredicted RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 ROPN1Q9HAT0 212 aaPredicted RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 FBXO28Q9NVF7 368 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 GTF3C4Q9UKN8 822 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 ZSCAN5CA6NGD5 496 aaPredicted RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 APRTP07741 180 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 TYK2P29597 1187 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 TNFAIP2Q03169 654 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 KCTD17Q8N5Z5 321 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 MXRA8Q9BRK3 442 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 CYP4F11Q9HBI6 524 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 P4HA2O15460 535 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 CREB3O43889 395 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 HLA-DRAP01903 254 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 COILP38432 576 aaPredicted RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 CASP2P42575 452 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 MAGEA4P43358 317 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 ITGA8P53708 1063 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 TAP1Q03518 808 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 SLC12A1Q13621 1099 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 ZNF571Q7Z3V5 609 aaPredicted RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 KIF2BQ8N4N8 673 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 RNF139Q8WU17 664 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 SKA2Q8WVK7 121 aaPredicted RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 CCDC124Q96CT7 223 aaKnown RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 TMEM8AQ9HCN3 771 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 OSGEPQ9NPF4 335 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 IL17RBQ9NRM6 502 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 AGLP35573 1532 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 PFDN1O60925 122 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 HNRNPH1P31943 449 aaKnown RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 EFNA5P52803 228 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 AP3M2P53677 418 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 GIT2Q14161 759 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 SPOUT1Q5T280 376 aaKnown RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 ST13P4Q8IZP2 240 aaPredicted RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 CCNYL1Q8N7R7 359 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 TRIM56Q9BRZ2 755 aaKnown RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 INTS13Q9NVM9 706 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 ZNF446Q9NWS9 450 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 THEGQ9P2T0 379 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 AFF2P51816 1311 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 FAM237AA0A1B0GTK4 181 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 CLGNO14967 610 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 COPS2P61201 443 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 FSCBQ5H9T9 825 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 KLF6Q99612 283 aaPredicted RBP12.12□□□□□ -0.47
RD3-201ENST00000367002 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 RAB6BQ9NRW1 208 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 SLIT1O75093 1534 aa12.12□□□□□ -0.47
RD3-201ENST00000367002 KIAA0391O15091 583 aaKnown RBP12.11□□□□□ -0.47
RD3-201ENST00000367002 HUS1O60921 280 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 KIF22Q14807 665 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 SH3RF1Q7Z6J0 888 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 AGBL1Q96MI9 1066 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 MCEEQ96PE7 176 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 OSBPL1AQ9BXW6 950 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 DIP2BQ9P265 1576 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 SMIM22K7EJ46 135 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 RALAP11233 206 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 PDGFRAP16234 1089 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 RXRBP28702 533 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 MTMR2Q13614 643 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 RABGAP1LQ5R372 815 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 LRRC43Q8N309 656 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 LPAR1Q92633 364 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 TEX13BQ9BXU2 312 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 UPF3AQ9H1J1 476 aaKnown RBP12.11□□□□□ -0.47
RD3-201ENST00000367002 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 NPHS2Q9NP85 383 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
RD3-201ENST00000367002 RBP3P10745 1247 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 ACTR2P61160 394 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
RD3-201ENST00000367002 ZSWIM1Q9BR11 485 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 SLC40A1Q9NP59 571 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 SLC12A6Q9UHW9 1150 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 STAP1Q9ULZ2 295 aa12.11□□□□□ -0.47
RD3-201ENST00000367002 POLRMTO00411 1230 aaKnown RBP12.11□□□□□ -0.47
RD3-201ENST00000367002 PIK3R2O00459 728 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms