RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 EFHD1Q9BUP0 239 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 CARD8Q9Y2G2 431 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 FLT1P17948 1338 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 HNRNPCL2B2RXH8 293 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 HNRNPCL1O60812 293 aaKnown RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 SHOX2O60902 331 aaPredicted RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 KRT34O76011 436 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 MFN2O95140 757 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 TTLL1O95922 423 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 ECE1P42892 770 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 RASA3Q14644 834 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 C10orf76Q5T2E6 689 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 ZNF384Q8TF68 577 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 SLITRK6Q9H5Y7 841 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 MAD2L2Q9UI95 211 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 TTC7AQ9ULT0 858 aaPredicted RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 A0A1B0GVG6 124 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 MGRN1O60291 552 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 BBS9Q3SYG4 887 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 FAM26FQ5R3K3 315 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 NOP9Q86U38 636 aaKnown RBP12.39□□□□□ -0.43
PRKN-206ENST00000366898 SCUBE1Q8IWY4 988 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 NSL1Q96IY1 281 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 ZWILCHQ9H900 591 aa12.39□□□□□ -0.43
PRKN-206ENST00000366898 ASAP2O43150 1006 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 BBOX1O75936 387 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 NAA20P61599 178 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 TAF1BQ53T94 588 aaPredicted RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 KIAA1755Q5JYT7 1200 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 ANKRD40Q6AI12 368 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 B3GNT6Q6ZMB0 384 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 MTDHQ86UE4 582 aaKnown RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 CRLF3Q8IUI8 442 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 TBC1D16Q8TBP0 767 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 NOL6Q9H6R4 1146 aaKnown RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 IL1RAPL1Q9NZN1 696 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 AGPSO00116 658 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 FNTAP49354 379 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 LPCAT2Q7L5N7 544 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 NLRP9Q7RTR0 991 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 USP38Q8NB14 1042 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 SERPINI1Q99574 410 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 KLF6Q99612 283 aaPredicted RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 HEY2Q9UBP5 337 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 ITIH6Q6UXX5 1313 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 LIN7AO14910 233 aaPredicted RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 ADCY6O43306 1168 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 GCNT3O95395 438 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 STAT3P40763 770 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 RGS2P41220 211 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 POLGP54098 1239 aaPredicted RBP12.38□□□□□ -0.43
PRKN-206ENST00000366898 ATL2Q8NHH9 583 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 EME1Q96AY2 570 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 ING2Q9H160 280 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 TRABDQ9H4I3 376 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 GGA2Q9UJY4 613 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.38□□□□□ -0.434e-10■■■■□ 21.6
PRKN-206ENST00000366898 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
PRKN-206ENST00000366898 KRT36O76013 467 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 MMP10P09238 476 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 CIITAP33076 1130 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 RALGDSQ12967 914 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 SBK1Q52WX2 424 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 BTNL9Q6UXG8 535 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 RNF19BQ6ZMZ0 732 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.37□□□□□ -0.435e-7■■■■■ 41.5
PRKN-206ENST00000366898 TEKT2Q9UIF3 430 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 SCAF8Q9UPN6 1271 aaKnown RBP12.37□□□□□ -0.43
PRKN-206ENST00000366898 DTNAQ9Y4J8 743 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 GOLGA8SH3BPF8 625 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 DRD4P21917 467 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 MTA1Q13330 715 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 MYBPC2Q14324 1141 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 SLC5A9Q2M3M2 681 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 PPP2R3CQ969Q6 453 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 ZNF570Q96NI8 536 aa12.37□□□□□ -0.43
PRKN-206ENST00000366898 PRPF18Q99633 342 aaKnown RBP12.37□□□□□ -0.43
PRKN-206ENST00000366898 APOBEC2Q9Y235 224 aaKnown RBP12.37□□□□□ -0.43
PRKN-206ENST00000366898 KLRC1P26715 233 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms