RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 OSBPL9Q96SU4 736 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 AGO2Q9UKV8 859 aaKnown RBP10.04□□□□□ -0.8
CNIH4-202ENST00000366857 GABRQQ9UN88 632 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 ZNF286BP0CG31 522 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 MCF2P10911 925 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 SLC9C1Q4G0N8 1177 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 PLEKHA7Q6IQ23 1121 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 C12orf50Q8NA57 414 aaPredicted RBP10.04□□□□□ -0.8
CNIH4-202ENST00000366857 RASSF8Q8NHQ8 419 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 AENQ8WTP8 325 aaKnown RBP10.04□□□□□ -0.8
CNIH4-202ENST00000366857 SLCO2A1Q92959 643 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 FUT8Q9BYC5 575 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 IFIH1Q9BYX4 1025 aaKnown RBP10.04□□□□□ -0.8
CNIH4-202ENST00000366857 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 EXOC7Q9UPT5 735 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 TTC3P53804 2025 aa10.04□□□□□ -0.8
CNIH4-202ENST00000366857 SCN8AQ9UQD0 1980 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 PIRO00625 290 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 CLTAP09496 248 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 GALCP54803 685 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 GPR162Q16538 588 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 CCDC40Q4G0X9 1142 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 EAPPQ56P03 285 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 SLFN12LQ6IEE8 588 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 EFCAB12Q6NXP0 572 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 ENOSF1Q7L5Y1 443 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 C2orf69Q8N8R5 385 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 EIF1ADQ8N9N8 165 aaKnown RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 POMGNT1Q8WZA1 660 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 PAGR1Q9BTK6 254 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 THAP2Q9H0W7 228 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 EPB41L4BQ9H329 900 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 NLRC4Q9NPP4 1024 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 AVENQ9NQS1 362 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 NRBP2Q9NSY0 501 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 ADAMTS1Q9UHI8 967 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 FRMD4BQ9Y2L6 1034 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 NRCAMQ92823 1304 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 OGTO15294 1046 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 SSBP05455 408 aaKnown RBP eCLIP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 MMEP08473 750 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 MYBL2P10244 700 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 NOMO3P69849 1222 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 TRNP1Q6NT89 227 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 CPNE8Q86YQ8 564 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 NIPA2Q8N8Q9 360 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 SNX27Q96L92 541 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 NAPGQ99747 312 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 MMRN2Q9H8L6 949 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 ENDOD1O94919 500 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 SMIM10L2AP0DMW4 78 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 SMIM10L2BP0DMW5 78 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 KCNE1P15382 129 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 CYLC1P35663 651 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 GRM5P41594 1212 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 GRIK4Q16099 956 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 EMC10Q5UCC4 262 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 ARRDC4Q8NCT1 418 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 UBE2Q2Q8WVN8 375 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 L1RE1Q9UN81 338 aa10.03□□□□□ -0.8
CNIH4-202ENST00000366857 TNRC18O15417 2968 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-202ENST00000366857 SRGAP2O75044 1071 aa10.02□□□□□ -0.8
CNIH4-202ENST00000366857 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.8
CNIH4-202ENST00000366857 CTNNA1P35221 906 aaKnown RBP10.02□□□□□ -0.8
CNIH4-202ENST00000366857 PTPN7P35236 360 aa10.02□□□□□ -0.8
CNIH4-202ENST00000366857 MAEAQ7L5Y9 396 aa10.02□□□□□ -0.8
CNIH4-202ENST00000366857 MRPL10Q7Z7H8 261 aaKnown RBP10.02□□□□□ -0.8
CNIH4-202ENST00000366857 TRIM58Q8NG06 486 aa10.02□□□□□ -0.8
CNIH4-202ENST00000366857 C2orf40Q9H1Z8 148 aa10.02□□□□□ -0.8
CNIH4-202ENST00000366857 PDE11AQ9HCR9 933 aa10.02□□□□□ -0.8
CNIH4-202ENST00000366857 ANKRD62A6NC57 917 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 H3BRB1 525 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 STAT1P42224 750 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 AP3M2P53677 418 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 POLGP54098 1239 aaPredicted RBP10.02□□□□□ -0.81
CNIH4-202ENST00000366857 BHLHA9Q7RTU4 235 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 CEP120Q8N960 986 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 ALG3Q92685 438 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 TSPAN18Q96SJ8 248 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 EPC1Q9H2F5 836 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 TUT1Q9H6E5 874 aaKnown RBP10.02□□□□□ -0.81
CNIH4-202ENST00000366857 GOLGA8IPA6NC78 632 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 GOLGA8JA6NMD2 632 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 MAGEB2O15479 319 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 CCNA1P78396 465 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 ASIC2Q16515 512 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 DHX37Q8IY37 1157 aaKnown RBP10.02□□□□□ -0.81
CNIH4-202ENST00000366857 LRRC71Q8N4P6 559 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 KBTBD7Q8WVZ9 684 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 TFAP2BQ92481 460 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 ELMO3Q96BJ8 720 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 LENG1Q96BZ8 264 aaPredicted RBP10.02□□□□□ -0.81
CNIH4-202ENST00000366857 FAM213AQ9BRX8 229 aa10.02□□□□□ -0.81
CNIH4-202ENST00000366857 LHX5Q9H2C1 402 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms