RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
MRPL55-213ENST00000366740 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-213ENST00000366740 LTB4R2Q9NPC1 389 aa12.88□□□□□ -0.35
MRPL55-213ENST00000366740 PRMT7Q9NVM4 692 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-213ENST00000366740 PCDHGA2Q9Y5H1 932 aa12.88□□□□□ -0.35
MRPL55-213ENST00000366740 CASTOR2A6NHX0 329 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 CCL16O15467 120 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 ADAM12O43184 909 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 LAMTOR5O43504 91 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 LILRB5O75023 590 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 XYLBO75191 536 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 ELAVL2Q12926 359 aaKnown RBP12.87□□□□□ -0.35
MRPL55-213ENST00000366740 RAB33AQ14088 237 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-213ENST00000366740 UVSSAQ2YD98 709 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
MRPL55-213ENST00000366740 RTL10Q7L3V2 364 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 CLDN23Q96B33 292 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 FZD8Q9H461 694 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-213ENST00000366740 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
MRPL55-213ENST00000366740 SHISA7A6NL88 538 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 TMEM189-UBE2V1I3L0A0 370 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 RECQL4O94761 1208 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 THP07101 528 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 SPATA31C1P0DKV0 1188 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 RPS9P46781 194 aaKnown RBP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 TRAPPC10P48553 1259 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 UBXN2BQ14CS0 331 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 AXDND1Q5T1B0 1012 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 CEP57Q86XR8 500 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 SLC7A14Q8TBB6 771 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 KXD1Q9BQD3 176 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 EPC1Q9H2F5 836 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 PDZD7Q9H5P4 517 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 HCFC1R1Q9NWW0 138 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
MRPL55-213ENST00000366740 MTRRQ9UBK8 725 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
MRPL55-213ENST00000366740 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
MRPL55-213ENST00000366740 TPRP12270 2363 aaKnown RBP12.85□□□□□ -0.35
MRPL55-213ENST00000366740 LRRIQ4A6NIV6 560 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 FAM170BA6NMN3 283 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 N4BP3O15049 544 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
MRPL55-213ENST00000366740 ECI2O75521 394 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 OR52Z1P0C646 297 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 FGFR3P22607 806 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 FZD5Q13467 585 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 GNL2Q13823 731 aaKnown RBP12.85□□□□□ -0.35
MRPL55-213ENST00000366740 IL17AQ16552 155 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 PABPC1LQ4VXU2 614 aaKnown RBP12.85□□□□□ -0.35
MRPL55-213ENST00000366740 ZBTB41Q5SVQ8 909 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 MCTP1Q6DN14 999 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 PIGOQ8TEQ8 1089 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 CCDC43Q96MW1 224 aaKnown RBP12.85□□□□□ -0.35
MRPL55-213ENST00000366740 NELL2Q99435 816 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 CCDC113Q9H0I3 377 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 GPRC5CQ9NQ84 441 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 ZSCAN32Q9NX65 697 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 SNTG2Q9NY99 539 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-213ENST00000366740 POLIQ9UNA4 740 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 EPG5Q9HCE0 2579 aa12.85□□□□□ -0.35
MRPL55-213ENST00000366740 ATG2BQ96BY7 2078 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 MED24O75448 989 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 EDN1P05305 212 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 CD72P21854 359 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 SDHBP21912 280 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 TARSP26639 723 aaKnown RBP12.84□□□□□ -0.35
MRPL55-213ENST00000366740 OR1D2P34982 312 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
MRPL55-213ENST00000366740 PTGDRQ13258 359 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 ORC2Q13416 577 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-213ENST00000366740 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 LARP1BQ659C4 914 aaKnown RBP12.84□□□□□ -0.35
MRPL55-213ENST00000366740 POTEHQ6S545 545 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 CD300LGQ6UXG3 332 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 TPRG1Q6ZUI0 275 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 CATSPER3Q86XQ3 398 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 MCPH1Q8NEM0 835 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 ATRIPQ8WXE1 791 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.84□□□□□ -0.35
MRPL55-213ENST00000366740 GDE1Q9NZC3 331 aa12.84□□□□□ -0.35
MRPL55-213ENST00000366740 NOL7Q9UMY1 257 aaKnown RBP12.84□□□□□ -0.35
MRPL55-213ENST00000366740 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms