RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 PCDHA3Q9Y5H8 950 aa18.7■□□□□ 0.58
TRIM11-202ENST00000366699 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
TRIM11-202ENST00000366699 TRAPPC3O43617 180 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 ATG7O95352 703 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 LDHAP00338 332 aaKnown RBP18.69■□□□□ 0.58
TRIM11-202ENST00000366699 PAEPP09466 180 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 NAMPTP43490 491 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 CLDN10P78369 228 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 CYP1B1Q16678 543 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 ZDHHC24Q6UX98 284 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 CYFIP1Q7L576 1253 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 DEPTORQ8TB45 409 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 TRIM11Q96F44 468 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 STYXL1Q9Y6J8 313 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 KIAA1217Q5T5P2 1943 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 PYGMP11217 842 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 DENND2CQ68D51 928 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 SLC13A5Q86YT5 568 aaPredicted RBP18.69■□□□□ 0.58
TRIM11-202ENST00000366699 PSPC1Q8WXF1 523 aaKnown RBP18.69■□□□□ 0.58
TRIM11-202ENST00000366699 DHX38Q92620 1227 aaKnown RBP18.69■□□□□ 0.58
TRIM11-202ENST00000366699 TLCD1Q96CP7 247 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 PORCNQ9H237 461 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 GPRC5DQ9NZD1 345 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 GRHL1Q9NZI5 618 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 CHORDC1Q9UHD1 332 aaPredicted RBP18.69■□□□□ 0.58
TRIM11-202ENST00000366699 FZD1Q9UP38 647 aa18.69■□□□□ 0.58
TRIM11-202ENST00000366699 ATMINO43313 823 aaPredicted RBP18.68■□□□□ 0.58
TRIM11-202ENST00000366699 TNNI1P19237 187 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 TAS1R3Q7RTX0 852 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 CROCCP2Q86T23 111 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 TRPM4Q8TD43 1214 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 ACP6Q9NPH0 428 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 AGO2Q9UKV8 859 aaKnown RBP18.68■□□□□ 0.58
TRIM11-202ENST00000366699 PARP14Q460N5 1801 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 ARID2Q68CP9 1835 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 K7ERI5 159 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 MYBL1P10243 752 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 RWDD2BP57060 319 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 BYSLQ13895 437 aaKnown RBP18.68■□□□□ 0.58
TRIM11-202ENST00000366699 CLEC16AQ2KHT3 1053 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 C15orf39Q6ZRI6 1047 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 DDX1Q92499 740 aaKnown RBP18.68■□□□□ 0.58
TRIM11-202ENST00000366699 TATDN2Q93075 761 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 FAM129AQ9BZQ8 928 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 EPB41L4BQ9H329 900 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 PCDHB2Q9Y5E7 798 aa18.68■□□□□ 0.58
TRIM11-202ENST00000366699 PIGRP01833 764 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 TMOD1P28289 359 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 RFC5P40937 340 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 RPL21P46778 160 aaKnown RBP18.67■□□□□ 0.58
TRIM11-202ENST00000366699 R3HDM1Q15032 1099 aaKnown RBP18.67■□□□□ 0.58
TRIM11-202ENST00000366699 TTC27Q6P3X3 843 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRIM11-202ENST00000366699 CYFIP2Q96F07 1278 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 PGM2Q96G03 612 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
TRIM11-202ENST00000366699 NRBP2Q9NSY0 501 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 CNOT8Q9UFF9 292 aaKnown RBP18.67■□□□□ 0.58
TRIM11-202ENST00000366699 SORBS3O60504 671 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 COILP38432 576 aaPredicted RBP18.67■□□□□ 0.58
TRIM11-202ENST00000366699 FNTAP49354 379 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 SP2Q02086 613 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 ARMC9Q7Z3E5 817 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 CCDC105Q8IYK2 499 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 ZDHHC14Q8IZN3 488 aa18.67■□□□□ 0.58
TRIM11-202ENST00000366699 NIFKQ9BYG3 293 aaKnown RBP18.67■□□□□ 0.58
TRIM11-202ENST00000366699 DCDC2CA8MYV0 355 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 ZACNQ401N2 412 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 C12orf50Q8NA57 414 aaPredicted RBP18.66■□□□□ 0.58
TRIM11-202ENST00000366699 TMEM143Q96AN5 459 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 EFCC1Q9HA90 598 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
TRIM11-202ENST00000366699 PASKQ96RG2 1323 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 LRRIQ4A6NIV6 560 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 CAND2O75155 1236 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 PIK3CAP42336 1068 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 SLMAPQ14BN4 828 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 SEPT14Q6ZU15 432 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 GPC2Q8N158 579 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 CENPTQ96BT3 561 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 BTBD6Q96KE9 485 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 TELO2Q9Y4R8 837 aa18.66■□□□□ 0.58
TRIM11-202ENST00000366699 GRIN3BO60391 1043 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 SHBGP04278 402 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 ARL2P36404 184 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 ALDH5A1P51649 535 aaPredicted RBP18.65■□□□□ 0.58
TRIM11-202ENST00000366699 FAM160B1Q5W0V3 765 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 PPP1R2P3Q6NXS1 205 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 LBX2Q6XYB7 198 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 RAPGEF5Q92565 580 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 RNF25Q96BH1 459 aaPredicted RBP18.65■□□□□ 0.58
TRIM11-202ENST00000366699 PI4K2AQ9BTU6 479 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 AVENQ9NQS1 362 aaPredicted RBP18.65■□□□□ 0.58
TRIM11-202ENST00000366699 RLFQ13129 1914 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 IGKV6D-21A0A0A0MT36 114 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 RARAP10276 462 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 ATP4AP20648 1035 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 GLRA2P23416 452 aa18.65■□□□□ 0.58
TRIM11-202ENST00000366699 NEDD9Q14511 834 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms