RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 USP15Q9Y4E8 981 aaPredicted RBP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 TEX33O43247 280 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 SGTAO43765 313 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 ABLIM3O94929 683 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF202O95125 648 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 IL33O95760 270 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 POMCP01189 267 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 SBK3P0C264 359 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 CTXN1P60606 82 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 DSC2Q02487 901 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 PLEKHG6Q3KR16 790 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 CATIPQ7Z7H3 387 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 RAVER1Q8IY67 606 aaKnown RBP4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 DRC7Q8IY82 874 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 NSUN6Q8TEA1 469 aaKnown RBP4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF483Q8TF39 744 aaPredicted RBP4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 HSPBAP1Q96EW2 488 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 CLPTM1LQ96KA5 538 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 MRGPRX4Q96LA9 322 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 FAM193BQ96PV7 902 aaPredicted RBP4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 DCLRE1CQ96SD1 692 aaKnown RBP4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 SCAND2PQ9GZW5 306 aaPredicted RBP4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 MMRN2Q9H8L6 949 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 TCF7L1Q9HCS4 588 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 FAM30AQ9NZY2 134 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 REXO2Q9Y3B8 237 aaKnown RBP4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 HS3ST3A1Q9Y663 406 aa4.23□□□□□ -1.73
RNU4-48P-201ENST00000365559 LRRC14BA6NHZ5 514 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 KIAA0391O15091 583 aaKnown RBP4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 AKAP10O43572 662 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 FZD7O75084 574 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 NCR1O76036 304 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 PEX11BO96011 259 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 FSHBP01225 129 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 ITGB1P05556 798 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 PF4V1P10720 104 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 PDCP20941 246 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 SLC6A4P31645 630 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 RAB27AP51159 221 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 CREMQ03060 361 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 TLE1Q04724 770 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 PIN1Q13526 163 aaPredicted RBP4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 DACT2Q5SW24 774 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 ODR4Q5SWX8 454 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 AGAP9Q5VTM2 703 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZFPM1Q8IX07 1006 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 RHOT2Q8IXI1 618 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 PRR18Q8N4B5 295 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 CLIP3Q96DZ5 547 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 SLC46A2Q9BY10 475 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 RTFDC1Q9BY42 306 aaPredicted RBP4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 RHOBTB2Q9BYZ6 727 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 C11orf54Q9H0W9 315 aaPredicted RBP4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 GSTO2Q9H4Y5 243 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 NRDE2Q9H7Z3 1164 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 AKIP1Q9NQ31 210 aa4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 CFAP20Q9Y6A4 193 aaKnown RBP4.22□□□□□ -1.73
RNU4-48P-201ENST00000365559 CCDC78A2IDD5 438 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 DIRC3C9JPN6 131 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 GRM6O15303 877 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 POU2F2P09086 479 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 ACVRL1P37023 503 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 RAB39AQ14964 217 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 KHDC1Q4VXA5 237 aaKnown RBP4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 TSHZ3Q63HK5 1081 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 PPP4R3AQ6IN85 833 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 GADL1Q6ZQY3 521 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 USP45Q70EL2 814 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 RHOUQ7L0Q8 258 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 MRGPREQ86SM8 312 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 TTC7BQ86TV6 843 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 SLC16A11Q8NCK7 471 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 OR56A1Q8NGH5 318 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 VRK1Q99986 396 aaPredicted RBP4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 ZSWIM1Q9BR11 485 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 MLST8Q9BVC4 326 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 GTPBP4Q9BZE4 634 aaKnown RBP4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 KLHL11Q9NVR0 708 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 CALCOCO1Q9P1Z2 691 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 ANKRD6Q9Y2G4 727 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 MAP3K2Q9Y2U5 619 aa4.21□□□□□ -1.74
RNU4-48P-201ENST00000365559 CDHR4A6H8M9 788 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 RNASET2O00584 256 aaKnown RBP4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 AKAP8O43823 692 aaKnown RBP4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 LPXNO60711 386 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 NDUFA10O95299 355 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 CD1AP06126 327 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 ELANEP08246 267 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 GCSHP23434 173 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 EPHB1P54762 984 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 NOMO3P69849 1222 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 KLF10Q13118 480 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 SNAPC2Q13487 334 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 BEAN1Q3B7T3 259 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 FLYWCH1Q4VC44 716 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 NOMO2Q5JPE7 1267 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 LRRC55Q6ZSA7 311 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 JPH3Q8WXH2 748 aaPredicted RBP4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 HAS1Q92839 578 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms