RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 MTMR12Q9C0I1 747 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 NDST4Q9H3R1 872 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 GOLGA2P5Q9HBQ8 144 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 METTL14Q9HCE5 456 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 TUBGCP4Q9UGJ1 667 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 COL4A6Q14031 1691 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 PPEF2O14830 753 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 CAPN15O75808 1086 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 UPP2O95045 317 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 VNN1O95497 513 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 SERPINC1P01008 464 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 CST3P01034 146 aaPredicted RBP11.66□□□□□ -0.54
SNX6-201ENST00000362031 C4BPAP04003 597 aaKnown RBP11.66□□□□□ -0.54
SNX6-201ENST00000362031 TNNI1P19237 187 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 MAGEA10P43363 369 aaPredicted RBP11.66□□□□□ -0.54
SNX6-201ENST00000362031 SCNN1GP51170 649 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 UBASH3AP57075 661 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 ZBTB6Q15916 424 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 MAN2A1Q16706 1144 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 C9orf50Q5SZB4 431 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 TDRD10Q5VZ19 366 aaKnown RBP11.66□□□□□ -0.54
SNX6-201ENST00000362031 DPY19L2P1Q6NXN4 242 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 FAM117BQ6P1L5 589 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 C15orf39Q6ZRI6 1047 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 SV2AQ7L0J3 742 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 FAM114A1Q8IWE2 563 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 TMC2Q8TDI7 906 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 SEMA4DQ92854 862 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 PAAF1Q9BRP4 392 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 CNTN3Q9P232 1028 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 INPP5FQ9Y2H2 1132 aa11.66□□□□□ -0.54
SNX6-201ENST00000362031 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 POMCP01189 267 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 KRT13P13646 458 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 FMO5P49326 533 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 RAB27AP51159 221 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 TFAMQ00059 246 aaKnown RBP11.65□□□□□ -0.54
SNX6-201ENST00000362031 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 UVSSAQ2YD98 709 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 SARM1Q6SZW1 724 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 RPUSD2Q8IZ73 545 aaKnown RBP11.65□□□□□ -0.54
SNX6-201ENST00000362031 C1orf127Q8N9H9 656 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 TAS1R2Q8TE23 839 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.54
SNX6-201ENST00000362031 CGRRF1Q99675 332 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 RSAD1Q9HA92 442 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 C1orf112Q9NSG2 853 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 TMEM161AQ9NX61 479 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 SIX4Q9UIU6 781 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 F8W810 466 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.54
SNX6-201ENST00000362031 EPHB6O15197 1021 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 AFPP02771 609 aaKnown RBP11.65□□□□□ -0.54
SNX6-201ENST00000362031 YARSP54577 528 aaKnown RBP11.65□□□□□ -0.54
SNX6-201ENST00000362031 PPP2R3AQ06190 1150 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 PPIGQ13427 754 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNX6-201ENST00000362031 ZNF280BQ86YH2 543 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 LMO3Q8TAP4 145 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 FNBP1Q96RU3 617 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 ASB7Q9H672 318 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 GIT1Q9Y2X7 761 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 TRANK1O15050 2925 aa11.65□□□□□ -0.54
SNX6-201ENST00000362031 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.55
SNX6-201ENST00000362031 ABHD14A-ACY1A0A1B0GW23 586 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 H0YGN5 161 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 DDHD2O94830 711 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 IL18RAPO95256 599 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 EOMESO95936 686 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 FGBP02675 491 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 ACTN1P12814 892 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 KCNE1P15382 129 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 SLC9A1P19634 815 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 PBX1P40424 430 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 ZNF75DP51815 510 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 TPM4P67936 248 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 KYAT1Q16773 422 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 ZACNQ401N2 412 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 TRAPPC11Q7Z392 1133 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 APBB1IPQ7Z5R6 666 aaPredicted RBP11.64□□□□□ -0.55
SNX6-201ENST00000362031 WDR49Q8IV35 697 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 TOP1MTQ969P6 601 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 PI4K2AQ9BTU6 479 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 TRIM5Q9C035 493 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 PLEKHA5Q9HAU0 1116 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 RALGAPA2Q2PPJ7 1873 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 SCN1AP35498 2009 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 ZBBXA8MT70 800 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 RNF225M0QZC1 329 aaPredicted RBP11.64□□□□□ -0.55
SNX6-201ENST00000362031 ADCY5O95622 1261 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 PFKMP08237 780 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 UBXN1Q04323 297 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 TMEM132DQ14C87 1099 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 FAM109BQ6ICB4 259 aaPredicted RBP11.64□□□□□ -0.55
SNX6-201ENST00000362031 SPOPLQ6IQ16 392 aa11.64□□□□□ -0.55
SNX6-201ENST00000362031 ELAC1Q9H777 363 aaKnown RBP11.64□□□□□ -0.55
SNX6-201ENST00000362031 AJAP1Q9UKB5 411 aaPredicted RBP11.64□□□□□ -0.55
SNX6-201ENST00000362031 SIK3Q9Y2K2 1263 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms