RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 AP1B1Q10567 949 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 ANO4Q32M45 955 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 ERGIC2Q96RQ1 377 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 SUN2Q9UH99 717 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 KIAA1257Q9ULG3 409 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 COL3A1P02461 1466 aaPredicted RBP14.24□□□□□ -0.13
LDB3-202ENST00000361373 TARSL2A2RTX5 802 aaKnown RBP14.24□□□□□ -0.13
LDB3-202ENST00000361373 RASA4BC9J798 803 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 KIF3CO14782 793 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 RASA4O43374 803 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 VCAM1P19320 739 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 C15orf52Q6ZUT6 534 aaKnown RBP14.24□□□□□ -0.13
LDB3-202ENST00000361373 USP49Q70CQ1 688 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 CHMP6Q96FZ7 201 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 FOXP3Q9BZS1 431 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 UNC45AQ9H3U1 944 aa14.24□□□□□ -0.13
LDB3-202ENST00000361373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.24□□□□□ -0.13
LDB3-202ENST00000361373 GPR182O15218 404 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 OGTO15294 1046 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 NVLO15381 856 aaKnown RBP14.23□□□□□ -0.13
LDB3-202ENST00000361373 HOXA2O43364 376 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 STRNO43815 780 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 ADCY1Q08828 1119 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 ZNF211Q13398 564 aaPredicted RBP14.23□□□□□ -0.13
LDB3-202ENST00000361373 EFHC1Q5JVL4 640 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 ARRDC4Q8NCT1 418 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 PDCD6IPQ8WUM4 868 aaKnown RBP14.23□□□□□ -0.13
LDB3-202ENST00000361373 KRT35Q92764 455 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 INTUQ9ULD6 942 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 MAPK13O15264 365 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 GTF2H1P32780 548 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 TAF6P49848 677 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 GALCP54803 685 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 NPEPPSP55786 919 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 IFT88Q13099 833 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 TMTC4Q5T4D3 741 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 YAF2Q8IY57 180 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 GPC2Q8N158 579 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 SH2D3AQ9BRG2 576 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 TRIM55Q9BYV6 548 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 AAASQ9NRG9 546 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 MYBPC2Q14324 1141 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 PID1Q7Z2X4 250 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 TARS2Q9BW92 718 aaKnown RBP14.23□□□□□ -0.13
LDB3-202ENST00000361373 DDX47Q9H0S4 455 aaKnown RBP14.23□□□□□ -0.13
LDB3-202ENST00000361373 SENP1Q9P0U3 644 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 TAF6LQ9Y6J9 622 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 GARTP22102 1010 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 NLRP11P59045 1033 aaKnown RBP14.23□□□□□ -0.13
LDB3-202ENST00000361373 ARHGAP18Q8N392 663 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 TRIM54Q9BYV2 358 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 DYRK4Q9NR20 520 aa14.23□□□□□ -0.13
LDB3-202ENST00000361373 DDTLA6NHG4 134 aaPredicted RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 SRGAP2O75044 1071 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 DCTN3O75935 186 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 TMEM253P0C7T8 217 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 TMPRSS15P98073 1019 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 P3H1Q32P28 736 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 ZC2HC1CQ53FD0 456 aaPredicted RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 RASGRP2Q7LDG7 609 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 KLHL29Q96CT2 875 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 ACTR5Q9H9F9 607 aaPredicted RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 AGPAT3Q9NRZ7 376 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 SNX12Q9UMY4 172 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 PXDNQ92626 1479 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.13
LDB3-202ENST00000361373 SULT1E1P49888 294 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 EIF3EP60228 445 aaKnown RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 COPS2P61201 443 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 ART3Q13508 389 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 C4orf22Q6V702 233 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 LRRC71Q8N4P6 559 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 MMTAG2Q9BU76 263 aaKnown RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 ANKRD20A4Q4UJ75 823 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 ANKRD20A8PQ5CZ79 823 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 FSCBQ5H9T9 825 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 ANKRD20A2Q5SQ80 823 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 ANKRD20A1Q5TYW2 823 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 C4orf19Q8IY42 314 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 PPCSQ9HAB8 311 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 DNAJC17Q9NVM6 304 aaKnown RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 MANSC4A6NHS7 340 aaPredicted RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 CLNS1AP54105 237 aaKnown RBP14.22□□□□□ -0.13
LDB3-202ENST00000361373 KIRREL3Q8IZU9 778 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 AGXT2Q9BYV1 514 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 IL25Q9H293 177 aa14.22□□□□□ -0.13
LDB3-202ENST00000361373 TCRBV5S4A2TA0A5A2 114 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 MTSS1O43312 755 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 OCRLQ01968 901 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 IZUMO3Q5VZ72 239 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 NIPA1Q7RTP0 329 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 HPDLQ96IR7 371 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 PITPNM3Q9BZ71 974 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 PTPAQ15257 358 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 NBPF9Q3BBW0 867 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 NBPF12Q5TAG4 269 aaPredicted RBP14.21□□□□□ -0.13
LDB3-202ENST00000361373 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.13
LDB3-202ENST00000361373 COLEC11Q9BWP8 271 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms