RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CEP55Q53EZ4 464 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 PLA2G4FQ68DD2 849 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 EPM2AIP1Q7L775 607 aaPredicted RBP9.71□□□□□ -0.85
TOP1-201ENST00000361337 FAM83AQ86UY5 434 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 FAM178BQ8IXR5 827 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 RNF168Q8IYW5 571 aaPredicted RBP9.71□□□□□ -0.85
TOP1-201ENST00000361337 ANKRD13AQ8IZ07 590 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 RNF169Q8NCN4 708 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 TTC16Q8NEE8 873 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 CENPTQ96BT3 561 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 RIPK3Q9Y572 518 aa9.71□□□□□ -0.85
TOP1-201ENST00000361337 IGF2BP3O00425 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
TOP1-201ENST00000361337 ASAP2O43150 1006 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 TGFB1I1O43294 461 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 ATMINO43313 823 aaPredicted RBP9.71□□□□□ -0.86
TOP1-201ENST00000361337 EXOC3O60645 756 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 OPHN1O60890 802 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 BAG2O95816 211 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 KRT16P08779 473 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 SRGAP2CP0DJJ0 459 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 NMT1P30419 496 aaKnown RBP9.71□□□□□ -0.86
TOP1-201ENST00000361337 COG7P83436 770 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 DEUP1Q05D60 604 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 AUHQ13825 339 aaKnown RBP9.71□□□□□ -0.86
TOP1-201ENST00000361337 CNGA2Q16280 664 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 ZNF746Q6NUN9 644 aaPredicted RBP9.71□□□□□ -0.86
TOP1-201ENST00000361337 HOOK3Q86VS8 718 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 RFFLQ8WZ73 363 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 PGM2Q96G03 612 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 RAB17Q9H0T7 212 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 VCXQ9H320 206 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 EBF2Q9HAK2 575 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 ACP6Q9NPH0 428 aa9.71□□□□□ -0.86
TOP1-201ENST00000361337 A0A0A6YYK5 440 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 NR3C2P08235 984 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 EIF3BP55884 814 aaKnown RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 SOX10P56693 466 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 EXOC3L1Q86VI1 746 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 ERICH1Q86X53 443 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 SYCE1Q8N0S2 351 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 BTBD6Q96KE9 485 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 SYT11Q9BT88 431 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 TEX13BQ9BXU2 312 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 DNAJC12Q9UKB3 198 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 PCDHA3Q9Y5H8 950 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 CEP290O15078 2479 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 EME2A4GXA9 379 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 TCP11X1B4DZS4 312 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 K7ENM7 598 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 WDR46O15213 610 aaKnown RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 SNX3O60493 162 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 DLATP10515 647 aaKnown RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 OSBPP22059 807 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 SOX5P35711 763 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 NOVP48745 357 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 MPP2Q14168 576 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 TAF1CQ15572 869 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 GJC2Q5T442 439 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 CDR2LQ86X02 465 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 PPFIBP2Q8ND30 876 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 GDAP1Q8TB36 358 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 L3MBTL3Q96JM7 780 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 PWWP2AQ96N64 755 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 FAM49AQ9H0Q0 323 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 ECT2Q9H8V3 914 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 ANKFY1Q9P2R3 1169 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 GABBR1Q9UBS5 961 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 TTC7AQ9ULT0 858 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 ALG6Q9Y672 507 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 RIPK2O43353 540 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 ACSL3O95573 720 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 SNHG28P0DPA3 235 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 SMARCA1P28370 1054 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 STAT1P42224 750 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 CTCFP49711 727 aaPredicted RBP9.7□□□□□ -0.86
TOP1-201ENST00000361337 ITIH4Q14624 930 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 TREML2Q5T2D2 321 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 SLFN12Q8IYM2 578 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 B4GALNT2Q8NHY0 566 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 BORCS6Q96GS4 357 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 IFT74Q96LB3 600 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 ETAA1Q9NY74 926 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 C15orf41Q9Y2V0 281 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 KDM3AQ9Y4C1 1321 aa9.7□□□□□ -0.86
TOP1-201ENST00000361337 FAM86B1E9PN63 330 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 FAM86B2P0C5J1 330 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 PEX3P56589 373 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 PPP4R3CPQ6ZMV5 832 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 ZC3H18Q86VM9 953 aaKnown RBP9.69□□□□□ -0.86
TOP1-201ENST00000361337 VPS36Q86VN1 386 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 ANKLE1Q8NAG6 615 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 SLC17A8Q8NDX2 589 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 RMDN2Q96LZ7 410 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 TP73O15350 636 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 CSDE1O75534 798 aaKnown RBP9.69□□□□□ -0.86
TOP1-201ENST00000361337 TMEM253P0C7T8 217 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 NQO1P15559 274 aaKnown RBP9.69□□□□□ -0.86
TOP1-201ENST00000361337 GBP1P32455 592 aa9.69□□□□□ -0.86
TOP1-201ENST00000361337 CFAP157Q5JU67 520 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms