RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 MSTO1Q9BUK6 570 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 HERC5Q9UII4 1024 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 FAM47E-STBD1D6RA91 191 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 ALBP02768 609 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 NDUFA5Q16718 116 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 RESP18Q5W5W9 173 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 LRRC39Q96DD0 335 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 CASS4Q9NQ75 786 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 SH3GLB2Q9NR46 395 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 BIRC5O15392 142 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 KLHL2O95198 593 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 TARSP26639 723 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 ADRM1Q16186 407 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 SIX5Q8N196 739 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 MAML3Q96JK9 1138 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 PI4KBQ9UBF8 816 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 MTO1Q9Y2Z2 717 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 MYO3BQ8WXR4 1341 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 PAX7P23759 505 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 EFHC2Q5JST6 749 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 TTC30AQ86WT1 665 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 MCRS1Q96EZ8 462 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 MPP4Q96JB8 637 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 FANCEQ9HB96 536 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 BFARQ9NZS9 450 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 MARCOQ9UEW3 520 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 SKAP2O75563 359 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 ANO4Q32M45 955 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 SDE2Q6IQ49 451 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 CNDP1Q96KN2 507 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 TSEN34Q9BSV6 310 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 CNPY3Q9BT09 278 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 TPD52L2O43399 206 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 PSMC3P17980 439 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 CNOT8Q9UFF9 292 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 DOLKQ9UPQ8 538 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 FAM47DPA6NHR8 397 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 TRIM13O60858 407 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 HIST1H2AGP0C0S8 130 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 HIST1H2ADP20671 130 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 ZNF699Q32M78 642 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 HIST1H2AHQ96KK5 128 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 OLFM1Q99784 485 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 HIST1H2AJQ99878 128 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 H2AFJQ9BTM1 129 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 AMACRQ9UHK6 382 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 DBR1Q9UK59 544 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 ABT1Q9ULW3 272 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 POLIQ9UNA4 740 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 PFASO15067 1338 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 PRAG1Q86YV5 1406 aa13.86□□□□□ -0.19
SRGAP3-201ENST00000360413 B2RBV5 119 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 ST8SIA6P61647 398 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 CCDC60Q8IWA6 550 aaPredicted RBP13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 RTL3Q8N8U3 475 aaKnown RBP13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 BCS1LQ9Y276 419 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 KCNA2P16389 499 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 AGBL2Q5U5Z8 902 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 RASGRP4Q8TDF6 673 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 NSL1Q96IY1 281 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 WNT8AQ9H1J5 351 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 KCNH4Q9UQ05 1017 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 RWDD3Q9Y3V2 267 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 AATKQ6ZMQ8 1374 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 CLDN3O15551 220 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 BBOX1O75936 387 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 CLPTM1O96005 669 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 BMP3P12645 472 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 HOXC9P31274 260 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 IL12RB1P42701 662 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 MAPK6Q16659 721 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 ATXN7L3BQ96GX2 97 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 TUBGCP4Q9UGJ1 667 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 CLASP1Q7Z460 1538 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 ZNF185O15231 689 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 IZUMO3Q5VZ72 239 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 DAPK2Q9UIK4 370 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 TRIM24O15164 1050 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 APBA3O96018 575 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 KCNQ4P56696 695 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 KYNUQ16719 465 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 P3H1Q32P28 736 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 DHX40Q8IX18 779 aaKnown RBP13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 PDCD6IPQ8WUM4 868 aaKnown RBP13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 AFG1LQ8WV93 481 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 F5H423 210 aaPredicted RBP13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 CYTH3O43739 400 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 RESTQ13127 1097 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 LONRF1Q17RB8 773 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 SGSM1Q2NKQ1 1148 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 MTHFD1LQ6UB35 978 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 CHMP1BQ7LBR1 199 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 SARS2Q9NP81 518 aaKnown RBP13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 ZNF804BA4D1E1 1349 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 USP1O94782 785 aa13.85□□□□□ -0.19
SRGAP3-201ENST00000360413 MFN2O95140 757 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms