RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 SCN3BQ9NY72 215 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.33□□□□□ -0.92
CTNND1-201ENST00000358694 HEATR9A2RTY3 570 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 AP3B1O00203 1094 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 KCNQ3O43525 872 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 SRP72O76094 671 aaKnown RBP9.33□□□□□ -0.92
CTNND1-201ENST00000358694 SFNP31947 248 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 CLK1P49759 484 aaKnown RBP9.33□□□□□ -0.92
CTNND1-201ENST00000358694 HIC1Q14526 733 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 DPCR1Q3MIW9 517 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 MDH1BQ5I0G3 518 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 CHSY1Q86X52 802 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 P3H2Q8IVL5 708 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 SLC25A41Q8N5S1 370 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 EPN3Q9H201 632 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 BLOC1S6Q9UL45 172 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 SLC39A10Q9ULF5 831 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 RARBP10826 455 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 CDC25BP30305 580 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 CRKP46108 304 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 ALDH1A3P47895 512 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 ATXN3P54252 364 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-201ENST00000358694 ZRANB3Q5FWF4 1079 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 SYCP2LQ5T4T6 812 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 KLHL31Q9H511 634 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 RBAKQ9NYW8 714 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-201ENST00000358694 SESN1Q9Y6P5 492 aa9.33□□□□□ -0.92
CTNND1-201ENST00000358694 CYP2D7A0A087X1C5 515 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 KCNN4O15554 427 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 MMP10P09238 476 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 YWHAQP27348 245 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 ZNF211Q13398 564 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 FAM167BQ9BTA0 163 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 MRPL1Q9BYD6 325 aaKnown RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 BCL2L14Q9BZR8 327 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 KRT84Q9NSB2 600 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 CIAO1O76071 339 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 C4BPBP20851 252 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 PRIM2P49643 509 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 TRIM65Q6PJ69 517 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 CNBD2Q96M20 576 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 OSBPL1AQ9BXW6 950 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 ALG13Q9NP73 1137 aaKnown RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 EVPLLA8MZ36 301 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 GUCY1A2P33402 732 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 IL6STP40189 918 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 GRAPQ13588 217 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 USP10Q14694 798 aaKnown RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 GSTA3Q16772 222 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 COMMD2Q86X83 199 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 CAMKK1Q8N5S9 505 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 GRAPLQ8TC17 118 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 SNF8Q96H20 258 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 ACAD9Q9H845 621 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 IQCA1LA6NCM1 817 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 FAM47DPA6NHR8 397 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 TFRCP02786 760 aaKnown RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 ETFBP38117 255 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 CNGA3Q16281 694 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 SLC44A4Q53GD3 710 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 CCDC60Q8IWA6 550 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 RHOT1Q8IXI2 618 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 MMGT1Q8N4V1 131 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 NBPF15Q8N660 670 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 PARD6BQ9BYG5 372 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 CEP72Q9P209 647 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 APPL1Q9UKG1 709 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 POTEFA5A3E0 1075 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 C6orf222P0C671 652 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 CHRM3P20309 590 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 GRK2P25098 689 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 HARS2P49590 506 aaKnown RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 EIF3EP60228 445 aaKnown RBP9.32□□□□□ -0.92
CTNND1-201ENST00000358694 SPP2Q13103 211 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 RABGAP1LQ5R372 815 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 PARVAQ9NVD7 372 aa9.32□□□□□ -0.92
CTNND1-201ENST00000358694 MYBP10242 640 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 ENO3P13929 434 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-201ENST00000358694 GPC1P35052 558 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 ADD2P35612 726 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 MAGOHP61326 146 aaKnown RBP9.31□□□□□ -0.92
CTNND1-201ENST00000358694 TMEM132BQ14DG7 1078 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 ZMYM1Q5SVZ6 1142 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 ZNF746Q6NUN9 644 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-201ENST00000358694 GPD1LQ8N335 351 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 TMC2Q8TDI7 906 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 WWP1Q9H0M0 922 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 TDRD3Q9H7E2 651 aaKnown RBP9.31□□□□□ -0.92
CTNND1-201ENST00000358694 RRAGDQ9NQL2 400 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-201ENST00000358694 CRLS1Q9UJA2 301 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 PCDHGA4Q9Y5G9 962 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 MYO3BQ8WXR4 1341 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 M0R3G1 203 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 KLHL18O94889 574 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 KRT75O95678 551 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 ITGAXP20702 1163 aa9.31□□□□□ -0.92
CTNND1-201ENST00000358694 SERPINB3P29508 390 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms