RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TRIM49CP0CI26 452 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TGFBRAP1Q8WUH2 860 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 AKR1B1P15121 316 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CYB5R4Q7L1T6 521 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 MAPKAPK5Q8IW41 473 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ST13P5Q8NFI4 369 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ZSWIM1Q9BR11 485 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ZBED2Q9BTP6 218 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 LY9Q9HBG7 655 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 RPL26L1Q9UNX3 145 aaKnown RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 DDX39AO00148 427 aaKnown RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 BCL10O95999 233 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 POTEIP0CG38 1075 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 FCER1AP12319 257 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KCNV1Q6PIU1 500 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ZCCHC7Q8N3Z6 543 aaKnown RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 MARCH10Q8NA82 808 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ERGIC2Q96RQ1 377 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 PCMTD2Q9NV79 361 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TTLL3Q9Y4R7 772 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 GOLGA8CPA6NN73 597 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 P4HA2O15460 535 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 DGKIO75912 1065 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 PTK7Q13308 1070 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KIF26BQ2KJY2 2108 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 USH1GQ495M9 461 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 RIBC1Q8N443 379 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 OXNAD1Q96HP4 312 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 PIGSQ96S52 555 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 SUN2Q9UH99 717 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CDYLQ9Y232 598 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TAF4O00268 1085 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TSPAN9O75954 239 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 LRRC24Q50LG9 513 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 PASD1Q8IV76 773 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 METTL13Q8N6R0 699 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 MTA3Q9BTC8 594 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 WHRNQ9P202 907 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 MEIS1O00470 390 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 LGR5O75473 907 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 LCA5LO95447 670 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 BCAMP50895 628 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 OVGP1Q12889 678 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CDKAL1Q5VV42 579 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 SLC25A41Q8N5S1 370 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 DEPTORQ8TB45 409 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KLF6Q99612 283 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ARHGEF38Q9NXL2 777 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 GALNT8Q9NY28 637 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF212Q9UDV6 495 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KRT19P08727 400 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KCNH2Q12809 1159 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF746Q6NUN9 644 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ZBTB49Q6ZSB9 765 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TMC3Q7Z5M5 1100 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 SETD3Q86TU7 594 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 MICU2Q8IYU8 434 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TBCKQ8TEA7 893 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 GLG1Q92896 1179 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 PIK3R2O00459 728 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 FOSP01100 380 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 IMPDH2P12268 514 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 FAM69CQ0P6D2 419 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CHI3L2Q15782 390 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF790Q6PG37 636 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 DDX17Q92841 729 aaKnown RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM237Q96Q45 408 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TRPC7Q9HCX4 862 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CIDEBQ9UHD4 219 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 SESN1Q9Y6P5 492 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CPDO75976 1380 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 F8W031 263 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CTSWP56202 376 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 USP4Q13107 963 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ALX1Q15699 326 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CDH24Q86UP0 819 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CALN1Q9BXU9 219 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 VPS11Q9H270 941 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 AATKQ6ZMQ8 1374 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 EIF4G3O43432 1585 aaKnown RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 PP2D1A8MPX8 630 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KRT36O76013 467 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KRT6AP02538 564 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 FTLP02792 175 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KRT6BP04259 564 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CDC27P30260 824 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KRT6CP48668 564 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 KLK7P49862 253 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 UBE3AQ05086 875 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ANKRD40Q6AI12 368 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 NAT14Q8WUY8 206 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CAPSLQ8WWF8 208 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 CENPTQ96BT3 561 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 TRIM9Q9C026 710 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ADAM22Q9P0K1 906 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 IPPQ9Y573 584 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 POGZQ7Z3K3 1410 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 A0A087WXM4 84 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 SERPINB2P05120 415 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms