RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 OTOP1Q7RTM1 612 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ZC3H18Q86VM9 953 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 FITM2Q8N6M3 262 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 PDCD7Q8N8D1 485 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 RSAD2Q8WXG1 361 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ZBTB10Q96DT7 871 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 RILPQ96NA2 401 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ZNF317Q96PQ6 595 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 P2RX7Q99572 595 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 TRAIPQ9BWF2 469 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 METTL5Q9NRN9 209 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ROBO3Q96MS0 1386 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 SRCAPQ6ZRS2 3230 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 GGPS1O95749 300 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 GSTA1P08263 222 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 KITP10721 976 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 IL1R1P14778 569 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ACOT2P49753 483 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 YWHAGP61981 247 aaKnown RBP eCLIP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 OGFOD1Q8N543 542 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 C1orf131Q8NDD1 294 aaKnown RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 FBXL13Q8NEE6 735 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ARMC2Q8NEN0 867 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 CFAP61Q8NHU2 1237 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 EPS8L1Q8TE68 723 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 MAML1Q92585 1016 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 SERPINB12Q96P63 405 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 C10orf88Q9H8K7 445 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 NINJ2Q9NZG7 142 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 PHTF1Q9UMS5 762 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 CACNA1SQ13698 1873 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 MGRN1O60291 552 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ETS1P14921 441 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 EPHB2P29323 1055 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 LACTB2Q53H82 288 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 C6orf163Q5TEZ5 329 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 SPOPLQ6IQ16 392 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 PYROXD1Q8WU10 500 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 CENPTQ96BT3 561 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 AGBL1Q96MI9 1066 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 OSBPL8Q9BZF1 889 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ROPN1BQ9BZX4 212 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 MYLK2Q9H1R3 596 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ROPN1Q9HAT0 212 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 NYAP2Q9P242 653 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 SEPT9Q9UHD8 586 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 USP21Q9UK80 565 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 R3HDM2Q9Y2K5 976 aaKnown RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 NEU2Q9Y3R4 380 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 NCANO14594 1321 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 C5orf60A6NFR6 353 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 SRRM3A6NNA2 597 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 KRT19P08727 400 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 SNHG28P0DPA3 235 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 PTGIRP43119 386 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 MTERF2Q49AM1 385 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 Q4G0T1 1027 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ATP13A4Q4VNC1 1196 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 SEZ6Q53EL9 994 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ANKRD20A2Q5SQ80 823 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ANKRD20A1Q5TYW2 823 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 LVRNQ6Q4G3 990 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 LDHDQ86WU2 507 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 CYP4X1Q8N118 509 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 ZNF668Q96K58 619 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 CNOT7Q9UIV1 285 aaKnown RBP6.98□□□□□ -1.29
CSDE1-203ENST00000358528 GTF3C4Q9UKN8 822 aa6.98□□□□□ -1.29
CSDE1-203ENST00000358528 CCDC195A0A1B0GUA6 201 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 CCDC160A6NGH7 325 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 TXNDC9O14530 226 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 GYG2O15488 501 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 BANF1O75531 89 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 RAD17O75943 681 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 LUC7L3O95232 432 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 P4HBP07237 508 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 YWHABP31946 246 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 MAN1A1P33908 653 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 QARSP47897 775 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 GABPAQ06546 454 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 BIRC2Q13490 618 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 MTMR1Q13613 665 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 BTNL9Q6UXG8 535 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 NLRX1Q86UT6 975 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 TEX2Q8IWB9 1127 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 BBOF1Q8ND07 529 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 HIPK4Q8NE63 616 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 RPS6KC1Q96S38 1066 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 IWS1Q96ST2 819 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PAGR1Q9BTK6 254 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 C12orf65Q9H3J6 166 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 RXFP1Q9HBX9 757 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 RAVER2Q9HCJ3 691 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 SPATA31A5Q5VU36 1347 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 SPATA31A7Q8IWB4 1347 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ARHGAP42A6NI28 874 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PAEPP09466 180 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ESRRAP11474 423 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 CNGA1P29973 690 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms