RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 DCTN2Q13561 401 aaKnown RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 PROSER3Q2NL68 480 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 PAPD7Q5XG87 772 aaKnown RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 SGMS1Q86VZ5 419 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 NBPF15Q8N660 670 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 ANKS1AQ92625 1134 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 PIGSQ96S52 555 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 GREM2Q9H772 168 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 TUBA8Q9NY65 449 aaPredicted RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 SMARCAL1Q9NZC9 954 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 UVRAGQ9P2Y5 699 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 PDE4DIPQ5VU43 2346 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 LIN7AO14910 233 aaPredicted RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 ZNF18P17022 549 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 OSBPP22059 807 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 WASHC2DQ5SRD0 308 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 TMEM270Q6UE05 265 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 AGR3Q8TD06 166 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 DNAJC7Q99615 494 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 AIM2O14862 343 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 TLK2Q86UE8 772 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 TMEM35BQ8NCS4 154 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 CDV3Q9UKY7 258 aaKnown RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 CAPN1P07384 714 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 MAPK7Q13164 816 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 FASTKD1Q53R41 847 aaKnown RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 ZNF746Q6NUN9 644 aaPredicted RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 LUZP2Q86TE4 346 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 NLRP10Q86W26 655 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 FUKQ8N0W3 1084 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 PALLDQ8WX93 1383 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 PTPN4P29074 926 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 KCNMA1Q12791 1236 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 JADE3Q92613 823 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 GGA2Q9UJY4 613 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 PHTF1Q9UMS5 762 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 KPNA4O00629 521 aaPredicted RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 CHRNDQ07001 517 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 KCTD1Q719H9 257 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 DDX42Q86XP3 938 aaKnown RBP eCLIP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 APOL6Q9BWW8 343 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 TRIM9Q9C026 710 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 CAAP1Q9H8G2 361 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 KCND1Q9NSA2 647 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 CORO1CQ9ULV4 474 aaPredicted RBP9.22□□□□□ -0.93
COL6A6-201ENST00000358511 HECW2Q9P2P5 1572 aa9.22□□□□□ -0.93
COL6A6-201ENST00000358511 CCDC78A2IDD5 438 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 SMAPO00193 183 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 ASNA1O43681 348 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 FKBP6O75344 327 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 C4BPBP20851 252 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 RGS2P41220 211 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 ADARP55265 1226 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 SLFN13Q68D06 897 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 ZNF786Q8N393 782 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 PPP2R3CQ969Q6 453 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 USP42Q9H9J4 1324 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 ALBP02768 609 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 HMOX2P30519 316 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 BTDP43251 543 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 FNTAP49354 379 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 TMC4Q7Z404 712 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 STX19Q8N4C7 294 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 RNF25Q96BH1 459 aaPredicted RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 PPP1R36Q96LQ0 422 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 MAGEB5Q9BZ81 275 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 WHRNQ9P202 907 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 SASH1O94885 1247 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 GCLMP48507 274 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 SERPINB9P50453 376 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 GEMIN4P57678 1058 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 PDAP1Q13442 181 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 PPP1R18Q6NYC8 613 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 ARHGAP27Q6ZUM4 889 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 NLRP9Q7RTR0 991 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 TBC1D10CQ8IV04 446 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 OXER1Q8TDS5 423 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 DDX17Q92841 729 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 OLA1Q9NTK5 396 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 STMN3Q9NZ72 180 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 ZC3H7BQ9UGR2 993 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 TYW5A2RUC4 315 aaKnown RBP9.21□□□□□ -0.93
COL6A6-201ENST00000358511 FCER1AP12319 257 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 GSTT1P30711 240 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 LPCAT2Q7L5N7 544 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 DDIASQ8IXT1 998 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 KIAA1586Q9HCI6 787 aa9.21□□□□□ -0.93
COL6A6-201ENST00000358511 VAMP7P51809 220 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 RCOR2Q8IZ40 523 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 CELF4Q9BZC1 486 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 CDK17Q00537 523 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 SYTL2Q9HCH5 934 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 NGRNQ9NPE2 291 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 C2CD2Q9Y426 696 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 UTYO14607 1347 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms