RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 PGM3O95394 542 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 CETPP11597 493 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 GTF2IP78347 998 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 BTKQ06187 659 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 MFSD14BQ5SR56 506 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 SLC20A1Q8WUM9 679 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 FAM136AQ96C01 138 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 FBXO6Q9NRD1 293 aaPredicted RBP12.14□□□□□ -0.47
CNOT3-202ENST00000358389 RGPD2P0DJD1 1756 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 GSC2O15499 205 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 CFBP00751 764 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 ITIH2P19823 946 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 PRDX5P30044 214 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 GPC5P78333 572 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 MED21Q13503 144 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 CLNKQ7Z7G1 428 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 ZNF653Q96CK0 615 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 QTRT2Q9H974 415 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 UBE2TQ9NPD8 197 aaPredicted RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 IL17RBQ9NRM6 502 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 MEGF6O75095 1541 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 STK10O94804 968 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 BAG6P46379 1132 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 PDIA5Q14554 519 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 STAT4Q14765 748 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 DAB2IPQ5VWQ8 1189 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 OTOAQ7RTW8 1153 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 SESTD1Q86VW0 696 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■■□□□ 12.2
CNOT3-202ENST00000358389 MIPEPQ99797 713 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 ANKFY1Q9P2R3 1169 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 TMCO1Q9UM00 188 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 TRAF3IP3Q9Y228 551 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 EYA4O95677 639 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 EPHA7Q15375 998 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 IZUMO3Q5VZ72 239 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 RBM12BQ8IXT5 1001 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 DNAJC18Q9H819 358 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 DNM3Q9UQ16 869 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 COMMD3-BMI1R4GMX3 469 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 EDF1O60869 148 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 IFNB1P01574 187 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 VAV1P15498 845 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 AMPD1P23109 780 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 MAGEA8P43361 318 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 PSMC4P43686 418 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 SH3BGRP55822 239 aaPredicted RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 AP2B1P63010 937 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 GIT2Q14161 759 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 GRAMD1BQ3KR37 738 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 C12orf65Q9H3J6 166 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 CHST7Q9NS84 486 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 PPARGC1AQ9UBK2 798 aaKnown RBP12.13□□□□□ -0.47
CNOT3-202ENST00000358389 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
CNOT3-202ENST00000358389 C2orf71A6NGG8 1288 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 SERPINB6P35237 376 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNOT3-202ENST00000358389 BPIFB4P59827 614 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 PPATQ06203 517 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
CNOT3-202ENST00000358389 EDRF1Q3B7T1 1238 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 RGS9BPQ6ZS82 235 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 MYCT1Q8N699 235 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 CCDC110Q8TBZ0 833 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 TTC17Q96AE7 1141 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 RILPQ96NA2 401 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 NUP85Q9BW27 656 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 IKZF4Q9H2S9 585 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 RMI1Q9H9A7 625 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 PHF24Q9UPV7 400 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 TOPAZ1Q8N9V7 1692 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 MYH4Q9Y623 1939 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
CNOT3-202ENST00000358389 GOLGA8SH3BPF8 625 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 GOLGA8MH3BSY2 632 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 M0R2N6 131 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 ATP6V1B1P15313 513 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 MAGEA10P43363 369 aaPredicted RBP12.12□□□□□ -0.47
CNOT3-202ENST00000358389 SLC45A4Q5BKX6 768 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 ZDHHC14Q8IZN3 488 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 RFWD2Q8NHY2 731 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 ZNF564Q8TBZ8 553 aaPredicted RBP12.12□□□□□ -0.47
CNOT3-202ENST00000358389 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 AGPAT1Q99943 283 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 STK33Q9BYT3 514 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 HOMER2Q9NSB8 354 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 USTQ9Y2C2 406 aa12.12□□□□□ -0.47
CNOT3-202ENST00000358389 ECM29Q5VYK3 1845 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms