RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TRPM4Q8TD43 1214 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 COA7Q96BR5 231 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 FAM136AQ96C01 138 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 LRRC37BQ96QE4 947 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 MYLK2Q9H1R3 596 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 WDR35Q9P2L0 1181 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
CAPN3-205ENST00000357568 NKX1-2Q9UD57 310 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-205ENST00000357568 COL2A1P02458 1487 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 IGKV6D-41A0A0C4DH26 115 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 FAM47DPA6NHR8 397 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 TP73O15350 636 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 SMIM24O75264 130 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 BCRP11274 1271 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 ABCB4P21439 1286 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 COPB2P35606 906 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 SPIRE1Q08AE8 756 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 TBC1D10BQ4KMP7 808 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 SDCCAG8Q86SQ7 713 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 VSIG1Q86XK7 387 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 DNAAF5Q86Y56 855 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 APOBEC3FQ8IUX4 373 aaKnown RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 ITFG2Q969R8 447 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 PRMT6Q96LA8 375 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 NUDCD1Q96RS6 583 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 VAT1LQ9HCJ6 419 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 KCNK9Q9NPC2 374 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 DMAC2Q9NW81 257 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 TMOD4Q9NZQ9 345 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 TMOD2Q9NZR1 351 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 SMG5Q9UPR3 1016 aaKnown RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 GNAT1P11488 350 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 VHLP40337 213 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 MPP2Q14168 576 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 Q4G0T1 1027 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 SLC45A4Q5BKX6 768 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 ZC3H12AQ5D1E8 599 aaKnown RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 GPATCH4Q5T3I0 446 aaKnown RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 STXBP4Q6ZWJ1 553 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 SLC9A9Q8IVB4 645 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 MGARPQ8TDB4 240 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 KRT35Q92764 455 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 ZNF333Q96JL9 665 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 FAM167BQ9BTA0 163 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 POLR3CQ9BUI4 534 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 TRAIPQ9BWF2 469 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 IDI2Q9BXS1 227 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 UVRAGQ9P2Y5 699 aa11.35□□□□□ -0.59
CAPN3-205ENST00000357568 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-205ENST00000357568 PMM2O15305 246 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 TGFB1I1O43294 461 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 TBCAO75347 108 aaKnown RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ASMTLO95671 621 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 CYP1A2P05177 515 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 SP100P23497 879 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 PTPN4P29074 926 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 RHBDL3P58872 404 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ZNF543Q08ER8 600 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 GSTA3Q16772 222 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 UBAP2Q5T6F2 1119 aaKnown RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 THEMIS2Q5TEJ8 643 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 CDC42EP5Q6NZY7 148 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ADAT2Q7Z6V5 191 aaKnown RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 LDHDQ86WU2 507 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ANKRD42Q8N9B4 389 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 DRAXINQ8NBI3 349 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 SLC7A6OSQ96CW6 309 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 FAM20AQ96MK3 541 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 SSU72Q9NP77 194 aaKnown RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 MTMR4Q9NYA4 1195 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 TRIM33Q9UPN9 1127 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 CHKBQ9Y259 395 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 PPP2R3BQ9Y5P8 575 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ZMYM2Q9UBW7 1377 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ANKRD63C9JTQ0 380 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ENTPD3O75355 529 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 GAS8O95995 478 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 SKIP12755 728 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 COMTP21964 271 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 IVDP26440 423 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 PTDSS1P48651 473 aaKnown RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 CASP4P49662 377 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 CATSPER3Q86XQ3 398 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ARHGAP18Q8N392 663 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 ETNPPLQ8TBG4 499 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 DENND1AQ8TEH3 1009 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 CRYGNQ8WXF5 182 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 DDX23Q9BUQ8 820 aaKnown RBP11.34□□□□□ -0.59
CAPN3-205ENST00000357568 TIPINQ9BVW5 301 aa11.34□□□□□ -0.59
CAPN3-205ENST00000357568 TBC1D10AQ9BXI6 508 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms