RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PLEKHA8Q96JA3 519 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 RNPC3Q96LT9 517 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 IMPDH2P12268 514 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TBC1D19Q8N5T2 526 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 SH3TC2Q8TF17 1288 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 RAD54LQ92698 747 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 ASIC4Q96FT7 647 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 SELENONQ9NZV5 590 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 GDAQ9Y2T3 454 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TCOF1Q13428 1488 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 A0A087WWV3 80 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TBKBP1A7MCY6 615 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 XPO1O14980 1071 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 ENO3P13929 434 aaPredicted RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 KYAT1Q16773 422 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 PPP1R18Q6NYC8 613 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 DHX40Q8IX18 779 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 THNSL1Q8IYQ7 743 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 KRT35Q92764 455 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 MTA3Q9BTC8 594 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 LRRC1Q9BTT6 524 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 EXOSC4Q9NPD3 245 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 TMEM161AQ9NX61 479 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 HEY1Q9Y5J3 304 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 ARSEP51690 589 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 FOXD4Q12950 439 aaPredicted RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 TRIP4Q15650 581 aaPredicted RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 NLRP10Q86W26 655 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 NSUN6Q8TEA1 469 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 OMA1Q96E52 524 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TMA16Q96EY4 203 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 UNC45AQ9H3U1 944 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 PARVAQ9NVD7 372 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 SLC9A2Q9UBY0 812 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 KANSL1LA0AUZ9 987 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 USP27XA6NNY8 438 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 USP17L5A8MUK1 530 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TRIM24O15164 1050 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 FGFR4P22455 802 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TBC1D10BQ4KMP7 808 aaPredicted RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TMC5Q6UXY8 1006 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
SMC4-202ENST00000357388 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 CHMP2BQ9UQN3 213 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 PPP4R4Q6NUP7 873 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 CLEC4GQ6UXB4 293 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 INPP5DQ92835 1189 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 SH3KBP1Q96B97 665 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 HDAC6Q9UBN7 1215 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 HMOX2P30519 316 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 KDM7AQ6ZMT4 941 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 GUF1Q8N442 669 aaKnown RBP13.49□□□□□ -0.25
SMC4-202ENST00000357388 PPHLN1Q8NEY8 458 aaKnown RBP13.49□□□□□ -0.25
SMC4-202ENST00000357388 PUS3Q9BZE2 481 aaKnown RBP13.49□□□□□ -0.25
SMC4-202ENST00000357388 BSDC1Q9NW68 430 aaPredicted RBP13.49□□□□□ -0.25
SMC4-202ENST00000357388 KPNA4O00629 521 aaPredicted RBP13.49□□□□□ -0.25
SMC4-202ENST00000357388 FTLP02792 175 aaPredicted RBP13.49□□□□□ -0.25
SMC4-202ENST00000357388 ZNF211Q13398 564 aaPredicted RBP13.49□□□□□ -0.25
SMC4-202ENST00000357388 EFHC2Q5JST6 749 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 FAM162AQ96A26 154 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 O00370 1275 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 APOL1O14791 398 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 SFNP31947 248 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 CDK8P49336 464 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 PEX3P56589 373 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 ACTR2P61160 394 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 MTMR1Q13613 665 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 C4orf22Q6V702 233 aa13.49□□□□□ -0.25
SMC4-202ENST00000357388 MAST1Q9Y2H9 1570 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 SSU72P8A0A1W2PR75 194 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 MAFGO15525 162 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 PLOD1Q02809 727 aaPredicted RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 LRRC36Q1X8D7 754 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 MTERF3Q96E29 417 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 MAP3K20Q9NYL2 800 aaKnown RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 RTN2O75298 545 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 MMP10P09238 476 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 NQO1P15559 274 aaKnown RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 PRCPP42785 496 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 KNOP1Q1ED39 458 aaKnown RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 USP17L2Q6R6M4 530 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 COL23A1Q86Y22 540 aaPredicted RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 RHPN2Q8IUC4 686 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 GALNT4Q8N4A0 578 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 RMDN3Q96TC7 470 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms