RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DLG4P78352 724 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 VPS37AQ8NEZ2 397 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 DGCR14Q96DF8 476 aaKnown RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MS4A14Q96JA4 679 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RAD21L1Q9H4I0 556 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 AS3MTQ9HBK9 375 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 PAK5Q9P286 719 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 H3BRJ5 948 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ZBTB5O15062 677 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 SUPT3HO75486 399 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 DLGAP2Q9P1A6 1054 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ERBB3P21860 1342 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 E9PCH4 1651 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 CDK7P50613 346 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 KRT76Q01546 638 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ANGPT1Q15389 498 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ENKURQ8TC29 256 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ST7Q9NRC1 585 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ADAM22Q9P0K1 906 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 OVOS2A0A0J9YW53 1432 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 OVOS2Q6IE36 1432 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 TMEM120BA0PK00 339 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 DRG2P55039 364 aaKnown RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 VCPIP1Q96JH7 1222 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 HMG20AQ9NP66 347 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 FAM32AQ9Y421 112 aaKnown RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 IQGAP1P46940 1657 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 DLATP10515 647 aaKnown RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 CHN1P15882 459 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RXRAP19793 462 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MAPK7Q13164 816 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MB21D2Q8IYB1 491 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RBBP8NLQ8NC74 664 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ATP6V1E2Q96A05 226 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 CACNA1AO00555 2505 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MYO3AQ8NEV4 1616 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 GOLGA8RI6L899 631 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RTN2O75298 545 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ANXA11P50995 505 aaKnown RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ATXN3P54252 364 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MINDY2Q8NBR6 621 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 TRIM54Q9BYV2 358 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ZWILCHQ9H900 591 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RNPEPL1Q9HAU8 725 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 SLC9A2Q9UBY0 812 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 FBXO40Q9UH90 709 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MAPRE3Q9UPY8 281 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 BIRC5O15392 142 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 PDHA1P08559 390 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 AADATQ8N5Z0 425 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 UBE2TQ9NPD8 197 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ANAPC7Q9UJX3 599 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 SNRPAP09012 282 aaKnown RBP6.9□□□□□ -1.3
VPS13B-202ENST00000357162 BARHL2Q9NY43 387 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 LRRC53A6NM62 1247 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 HOXC6P09630 235 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 TECP42680 631 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 NR1H2P55055 460 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 RAB25P57735 213 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 EXOSC10Q01780 885 aaKnown RBP6.9□□□□□ -1.3
VPS13B-202ENST00000357162 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 KLHL12Q53G59 568 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 NT5DC1Q5TFE4 455 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 HEATR6Q6AI08 1181 aaKnown RBP6.9□□□□□ -1.3
VPS13B-202ENST00000357162 TBCBQ99426 244 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 INO80BQ9C086 356 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-202ENST00000357162 RSAD1Q9HA92 442 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 RIC8BQ9NVN3 520 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 THAP1Q9NVV9 213 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 ZC3H7BQ9UGR2 993 aaKnown RBP6.9□□□□□ -1.3
VPS13B-202ENST00000357162 SLCO1A2P46721 670 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 CYP27A1Q02318 531 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 PTK2BQ14289 1009 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 ELMSAN1Q6PJG2 1045 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 CDYLQ9Y232 598 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 POTEMA6NI47 508 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 BTNL10A8MVZ5 291 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 CD2BP2O95400 341 aaKnown RBP6.9□□□□□ -1.3
VPS13B-202ENST00000357162 CCDC15Q0P6D6 951 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 KCNH2Q12809 1159 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 BOLA3Q53S33 107 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 TTBK2Q6IQ55 1244 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 POTEHQ6S545 545 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 POTEGQ6S5H5 508 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 RMND5BQ96G75 393 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-202ENST00000357162 MUC13Q9H3R2 512 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 NCAM2O15394 837 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 SDC4P31431 198 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 ARMCX4Q5H9R4 360 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 LCORLQ8N3X6 602 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 LRRC39Q96DD0 335 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 ZNF518BQ9C0D4 1074 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 C2orf40Q9H1Z8 148 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 LOXHD1Q8IVV2 1947 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 FAM173BQ6P4H8 233 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 TINF2Q9BSI4 451 aa6.9□□□□□ -1.3
VPS13B-202ENST00000357162 RAD23AP54725 363 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 RAPH1Q70E73 1250 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 APEX2Q9UBZ4 518 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 PKDREJQ9NTG1 2253 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms