RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 GTF3C4Q9UKN8 822 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 SNX3O60493 162 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 BMP6P22004 513 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 HMOX2P30519 316 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 EVA1CP58658 441 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 BTBD10Q9BSF8 475 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 DOCK2Q92608 1830 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 SMCO2A6NFE2 343 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 ZSCAN5CA6NGD5 496 aaPredicted RBP6.94□□□□□ -1.3
TRIM38-201ENST00000357085 KPNA7A9QM74 516 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 CLPTM1O96005 669 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 ENPEPQ07075 957 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 KCNMA1Q12791 1236 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 THOC5Q13769 683 aaKnown RBP6.94□□□□□ -1.3
TRIM38-201ENST00000357085 SNX17Q15036 470 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 RNF207Q6ZRF8 634 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 MAEAQ7L5Y9 396 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 PRUNE1Q86TP1 453 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 DDX42Q86XP3 938 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRIM38-201ENST00000357085 HELBQ8NG08 1087 aaPredicted RBP6.94□□□□□ -1.3
TRIM38-201ENST00000357085 TBC1D16Q8TBP0 767 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 IGDCC4Q8TDY8 1250 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 EEF2KMTQ96G04 330 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 KIAA1586Q9HCI6 787 aa6.94□□□□□ -1.3
TRIM38-201ENST00000357085 C2CD2LO14523 706 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 MAFGO15525 162 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 PSMG1O95456 288 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 CCDC130P13994 396 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 COPAP53621 1224 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 C6orf203Q9P0P8 240 aaPredicted RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DNAJC6O75061 913 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 ZBED4O75132 1171 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 CDK7P50613 346 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 IKQ13123 557 aaPredicted RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 RINLQ6ZS11 566 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 TMC4Q7Z404 712 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 TBC1D10CQ8IV04 446 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 EXOC8Q8IYI6 725 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 RASGEF1CQ8N431 466 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 MRRFQ96E11 262 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 FAM89AQ96GI7 184 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SPATA16Q9BXB7 569 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DKK3Q9UBP4 350 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 AGTPBP1Q9UPW5 1226 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 MYH14Q7Z406 1995 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 WDR46O15213 610 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 BAIAP3O94812 1187 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 KRT6AP02538 564 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 KRT6BP04259 564 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 LDHBP07195 334 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 PLEKP08567 350 aaPredicted RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 EPHB2P29323 1055 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 PSMC1P62191 440 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 COASYQ13057 564 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SLCO2A1Q92959 643 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 PRDM16Q9HAZ2 1276 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 CSDE1O75534 798 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 PRDM1O75626 825 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 TGDSO95455 350 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 KRT7P08729 469 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 TBXAS1P24557 533 aaPredicted RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 ZAP70P43403 619 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 CHN2P52757 468 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 BFSP1Q12934 665 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 HIF1AQ16665 826 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 ZNF507Q8TCN5 953 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 NT5C1BQ96P26 610 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SLC12A6Q9UHW9 1150 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 LNPEPQ9UIQ6 1025 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 RAB26Q9ULW5 256 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 CAMTA1Q9Y6Y1 1673 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 COPEO14579 308 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 ZC3H11AO75152 810 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 RASA3Q14644 834 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 ZC3H12AQ5D1E8 599 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 NLRP9Q7RTR0 991 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 CCNJLQ8IV13 435 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 PBXIP1Q96AQ6 731 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 EPB41L1Q9H4G0 881 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 XAB2Q9HCS7 855 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SPDYE5A6NIY4 337 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 BTBD19C9JJ37 291 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 GCNT3O95395 438 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 KRT75O95678 551 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 GTF2H1P32780 548 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 AP3M2P53677 418 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 ANTXR2P58335 489 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SLC29A2Q14542 456 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 LONRF1Q17RB8 773 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 AASDHQ4L235 1098 aaPredicted RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SEC14L1Q92503 715 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 PLGRKTQ9HBL7 147 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 XDHP47989 1333 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 A0A1B0GW55 424 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 A1BGP04217 495 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 S100BP04271 92 aaPredicted RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DUX4L2P0CJ85 424 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DUX4L3P0CJ86 424 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DUX4L4P0CJ87 422 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms