RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 KCNA2P16389 499 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 C16orf89Q6UX73 402 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 C18orf8Q96DM3 657 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 EGFL8Q99944 293 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 MRPL1Q9BYD6 325 aaKnown RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 SMARCAL1Q9NZC9 954 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 SMAPO00193 183 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 SEC24DO94855 1032 aaPredicted RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 LRRC36Q1X8D7 754 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 PDCD6IPQ8WUM4 868 aaKnown RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 EME1Q96AY2 570 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 THTPAQ9BU02 230 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 ZNF609O15014 1411 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 IREB2P48200 963 aaKnown RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 ERFP50548 548 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 SESN2P58004 480 aaPredicted RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 CIAPIN1Q6FI81 312 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 SNRNP48Q6IEG0 339 aaKnown RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 PODNQ7Z5L7 613 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 SYN2Q92777 582 aaPredicted RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 PLEKHG2Q9H7P9 1386 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 NPHP3-ACAD11A0A0J9YXS1 232 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 RPS6KA4O75676 772 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 MXD4Q14582 209 aaPredicted RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 FAM129AQ9BZQ8 928 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 RUBCNLQ9H714 662 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 DDX28Q9NUL7 540 aaKnown RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 HSPBP1Q9NZL4 362 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 ATP9BO43861 1147 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 PYGLP06737 847 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 ATG9AQ7Z3C6 839 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 MARCH10Q8NA82 808 aaPredicted RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 PGBD4Q96DM1 585 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 ARHGEF26Q96DR7 871 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 UNC45AQ9H3U1 944 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 PCDHA10Q9Y5I2 948 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 B2RBV5 119 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 NME3Q13232 169 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 TRIP10Q15642 601 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 C12orf60Q5U649 245 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 KIF2BQ8N4N8 673 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 SLC30A5Q8TAD4 765 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 ATXN7L3BQ96GX2 97 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 TBC1D23Q9NUY8 699 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 FHOD1Q9Y613 1164 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 A8MXQ7 604 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 IGF2BP3O00425 579 aaKnown RBP eCLIP15.62■□□□□ 0.09
CHD4-201ENST00000357008 MAGEA4P43358 317 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 KDM7AQ6ZMT4 941 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 MASTLQ96GX5 879 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 MYO1DO94832 1006 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 APRTP07741 180 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 SZRD1Q7Z422 152 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 SCN4BQ8IWT1 228 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 REXO1L1PQ8IX06 675 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 CELF1Q92879 486 aaKnown RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 ASCC2Q9H1I8 757 aaPredicted RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 ADNPQ9H2P0 1102 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 SP110Q9HB58 689 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 SUPT3HO75486 399 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 RECQLP46063 649 aaPredicted RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 EFNA5P52803 228 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 SMAD1Q15797 465 aaKnown RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 XPO7Q9UIA9 1087 aaKnown RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 MYMKA6NI61 221 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 ENO3P13929 434 aaPredicted RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 PIGHQ14442 188 aaPredicted RBP15.62■□□□□ 0.09
CHD4-201ENST00000357008 KRT33BQ14525 404 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 KYNUQ16719 465 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 LZICQ8WZA0 190 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 GCNAQ96QF7 691 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 ADAM33Q9BZ11 813 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 RAB6BQ9NRW1 208 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 KLHL11Q9NVR0 708 aa15.62■□□□□ 0.09
CHD4-201ENST00000357008 KYAT1Q16773 422 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 UGP2Q16851 508 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 WDR93Q6P2C0 686 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 KIAA2013Q8IYS2 634 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TMEM117Q9H0C3 514 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TDRD3Q9H7E2 651 aaKnown RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 ARAP3Q8WWN8 1544 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 MYO3BQ8WXR4 1341 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 UBA6A0AVT1 1052 aaPredicted RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 GNAT1P11488 350 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 ADORA2BP29275 332 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 PRUNE1Q86TP1 453 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 ZNF555Q8NEP9 628 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 ERGIC2Q96RQ1 377 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TRIM62Q9BVG3 475 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 NOD2Q9HC29 1040 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 RGL1Q9NZL6 768 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 BLOC1S6Q9UL45 172 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 HLA-DPA1P20036 260 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 PTK7Q13308 1070 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 BARGINQ6ZT62 677 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms