RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MTMR12Q9C0I1 747 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 NUCKS1Q9H1E3 243 aaKnown RBP19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 CXCL16Q9H2A7 254 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 RAB20Q9NX57 234 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 APEX2Q9UBZ4 518 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 PADI3Q9ULW8 664 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 PLAGL2Q9UPG8 496 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 GPR182O15218 404 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 HLA-DRAP01903 254 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 NFICP08651 508 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 COL6A1P12109 1028 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 GJA8P48165 433 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 ATN1P54259 1190 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 JAM2P57087 298 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 CDK17Q00537 523 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 SLC39A5Q6ZMH5 540 aa19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 CCAR2Q8N163 923 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 SMG8Q8ND04 991 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 CCDC94Q9BW85 323 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 ZNHIT6Q9NWK9 470 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 KIAA0100Q14667 2235 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-202ENST00000356800 SOWAHDA6NJG2 315 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 AP3M2P53677 418 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 TFAMQ00059 246 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 BIRC3Q13489 604 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 DUOXA2Q1HG44 320 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 TWF2Q6IBS0 349 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 JADE1Q6IE81 842 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 GPIHBP1Q8IV16 184 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 TMEM130Q8N3G9 435 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 SYN2Q92777 582 aaPredicted RBP19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 CHP1Q99653 195 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 PI4K2AQ9BTU6 479 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 TRIM6Q9C030 488 aaPredicted RBP19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 ASB7Q9H672 318 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 DNAJC12Q9UKB3 198 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 CCP110O43303 1012 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 MGEA5O60502 916 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 PQBP1O60828 265 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 PAK2Q13177 524 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 TRAPPC11Q7Z392 1133 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 CAGE1Q8TC20 777 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 SNX27Q96L92 541 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 GPR88Q9GZN0 384 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 CHST12Q9NRB3 414 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 DAAM1Q9Y4D1 1078 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 IPPQ9Y573 584 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 SQORQ9Y6N5 450 aa19.59■□□□□ 0.73
SMARCD3-202ENST00000356800 RECQL4O94761 1208 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 AKAP5P24588 427 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 PIK3CAP42336 1068 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 DSC3Q14574 896 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 MTF1Q14872 753 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 ALKAL1Q6UXT8 129 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 RAD9BQ6WBX8 426 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 ANKRD33Q7Z3H0 272 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 KAT5Q92993 513 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 APOL6Q9BWW8 343 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 MYO6Q9UM54 1294 aa19.58■□□□□ 0.72
SMARCD3-202ENST00000356800 CST3P01034 146 aaPredicted RBP19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 NCOA4Q13772 614 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 RAPGEF1Q13905 1077 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 USP38Q8NB14 1042 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 HELQQ8TDG4 1101 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 TATDN2Q93075 761 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 ZMAT2Q96NC0 199 aaKnown RBP19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 STK33Q9BYT3 514 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 PLEKHA5Q9HAU0 1116 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 UBE2TQ9NPD8 197 aaPredicted RBP19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 PCDHB2Q9Y5E7 798 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 TANC1Q9C0D5 1861 aa19.57■□□□□ 0.72
SMARCD3-202ENST00000356800 PHACTR2O75167 634 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 TMEM191BP0C7N4 346 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 PNMA6AP0CW24 399 aaPredicted RBP19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 SELPP16109 830 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 DRAP1Q14919 205 aaPredicted RBP19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 SFMBT2Q5VUG0 894 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 TOGARAM2Q6ZUX3 1019 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 LRRC8DQ7L1W4 858 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 CD302Q8IX05 232 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 CXorf38Q8TB03 319 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 ANKRD36BP1Q96IX9 119 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 KREMEN1Q96MU8 473 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 NT5C1BQ96P26 610 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 SPAG5Q96R06 1193 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 FAM105AQ9NUU6 356 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 AIPL1Q9NZN9 384 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 SIX4Q9UIU6 781 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 SCN5AQ14524 2016 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 USP27XA6NNY8 438 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 F8VZ95 297 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 ZSCAN12O43309 604 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 ZC3H11AO75152 810 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 TNNC2P02585 160 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 PLEKP08567 350 aaPredicted RBP19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 RFX1P22670 979 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 BFSP2Q13515 415 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 GPNMBQ14956 572 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms