RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FUT11Q495W5 492 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 LRRC71Q8N4P6 559 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 ASXL2Q76L83 1435 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 A0A1B0GW55 424 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 LRRIQ3A6PVS8 624 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 MYO1CO00159 1063 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 PFKFB2O60825 505 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUX4L2P0CJ85 424 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUX4L3P0CJ86 424 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUX4L4P0CJ87 422 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUX4L5P0CJ88 424 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUX4L6P0CJ89 424 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUX4L7P0CJ90 424 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 OSBPL6Q9BZF3 934 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP44Q9H0E7 712 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 PLEKHA5Q9HAU0 1116 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUX4Q9UBX2 424 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 POLR3AO14802 1390 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 IQCA1LA6NCM1 817 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 GPC1P35052 558 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 TFDP2Q14188 446 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 NOL9Q5SY16 702 aaKnown RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L6PQ6QN14 398 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 RRAGDQ9NQL2 400 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 SYNGAP1Q96PV0 1343 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 ALOX15P16050 662 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 EIF3EP60228 445 aaKnown RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DUOXA2Q1HG44 320 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 PI16Q6UXB8 463 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 TTC13Q8NBP0 860 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 EAF2Q96CJ1 260 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 NDST4Q9H3R1 872 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 GGT7Q9UJ14 662 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DDX39BQ13838 428 aaKnown RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 CCDC149Q6ZUS6 474 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 GSPT2Q8IYD1 628 aaKnown RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 ATPAF2Q8N5M1 289 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 PTPRN2Q92932 1015 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 IMPAD1Q9NX62 359 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 SRPRBQ9Y5M8 271 aaKnown RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 NDUFA10O95299 355 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 FAM107AO95990 144 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 FTLP02792 175 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 ARSEP51690 589 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 LMBRD2Q68DH5 695 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 DTX3LQ8TDB6 740 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 ZFATQ9P243 1243 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 F8W810 466 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 PYGMP11217 842 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 CYP19A1P11511 503 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 RABGGTAQ92696 567 aa18.12■□□□□ 0.49
COL27A1-201ENST00000356083 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 MARCOQ9UEW3 520 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-201ENST00000356083 CHRM3P20309 590 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 ICE2Q659A1 982 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 SLC25A24Q6NUK1 477 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 ZNF564Q8TBZ8 553 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-201ENST00000356083 THAP11Q96EK4 314 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 ZMYM3Q14202 1370 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 NUDT14O95848 222 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 YWHAQP27348 245 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 ACTR2P61160 394 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 MCPH1Q8NEM0 835 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 RNF26Q9BY78 433 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-201ENST00000356083 AKIRIN2Q53H80 203 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 RNF149Q8NC42 400 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 LEMD2Q8NC56 503 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 FAM136AQ96C01 138 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 FBXL21Q9UKT6 434 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 GYS2P54840 703 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 C1orf54Q8WWF1 131 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 FHOD1Q9Y613 1164 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 AOX1Q06278 1338 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 KRT20P35900 424 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 PADI6Q6TGC4 694 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 FAM167AQ96KS9 214 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 CCT7Q99832 543 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 POTEMA6NI47 508 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 DGKIO75912 1065 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 GTF2E2P29084 291 aaKnown RBP18.11■□□□□ 0.49
COL27A1-201ENST00000356083 HARS2P49590 506 aaKnown RBP18.11■□□□□ 0.49
COL27A1-201ENST00000356083 CSNK2BP67870 215 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 LAMC2Q13753 1193 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 LAYNQ6UX15 382 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 RD3Q7Z3Z2 195 aa18.11■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L10C9JJH3 530 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 PRELPP51888 382 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms