RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 MFSD14AQ96MC6 490 aa20.89■□□□□ 0.94
COL13A1-201ENST00000354547 C11orf70Q9BRQ4 267 aa20.89■□□□□ 0.94
COL13A1-201ENST00000354547 KLHL11Q9NVR0 708 aa20.89■□□□□ 0.94
COL13A1-201ENST00000354547 GGT7Q9UJ14 662 aa20.89■□□□□ 0.94
COL13A1-201ENST00000354547 COQ4Q9Y3A0 265 aa20.89■□□□□ 0.94
COL13A1-201ENST00000354547 RARGP13631 454 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 MMP13P45452 471 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 LIG4P49917 911 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 ADCY2Q08462 1091 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 AUHQ13825 339 aaKnown RBP20.89■□□□□ 0.93
COL13A1-201ENST00000354547 SLMAPQ14BN4 828 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 KYNUQ16719 465 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 FKBP1CQ5VVH2 108 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 SNRNP48Q6IEG0 339 aaKnown RBP20.89■□□□□ 0.93
COL13A1-201ENST00000354547 MORC4Q8TE76 937 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 DYDC1Q8WWB3 177 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 ZBTB45Q96K62 511 aaPredicted RBP20.89■□□□□ 0.93
COL13A1-201ENST00000354547 KIAA1683Q9H0B3 1180 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 TBK1Q9UHD2 729 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 CD2APQ9Y5K6 639 aa20.89■□□□□ 0.93
COL13A1-201ENST00000354547 SRRM3A6NNA2 597 aaPredicted RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 CCDC60Q8IWA6 550 aaPredicted RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 MCOLN2Q8IZK6 566 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 ZKSCAN4Q969J2 545 aaPredicted RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 JPH2Q9BR39 696 aaPredicted RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 POLR3FQ9H1D9 316 aaPredicted RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 ATXN2Q99700 1313 aaKnown RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 VWA5AO00534 786 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 ADCY8P40145 1251 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 TCEAL1Q15170 157 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 CYP1B1Q16678 543 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 SAMD7Q7Z3H4 446 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 ANKRD42Q8N9B4 389 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 XPNPEP1Q9NQW7 623 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 HAUS2Q9NVX0 235 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 MROH7Q68CQ1 1323 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 NSFP46459 744 aaKnown RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 PRKCEQ02156 737 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 ANKRD20A8PQ5CZ79 823 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 TAS1R3Q7RTX0 852 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 ATXN2LQ8WWM7 1075 aaKnown RBP20.88■□□□□ 0.93
COL13A1-201ENST00000354547 TIPINQ9BVW5 301 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 KCNK9Q9NPC2 374 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 ANKFY1Q9P2R3 1169 aa20.88■□□□□ 0.93
COL13A1-201ENST00000354547 CCND2P30279 289 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 PIK3CAP42336 1068 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 NLRP11P59045 1033 aaKnown RBP20.87■□□□□ 0.93
COL13A1-201ENST00000354547 WDR44Q5JSH3 913 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 SPDYCQ5MJ68 293 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 USP37Q86T82 979 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 TMC2Q8TDI7 906 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 IFT74Q96LB3 600 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 PLVAPQ9BX97 442 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 SLC40A1Q9NP59 571 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 RALAP11233 206 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 CD58P19256 250 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 ITGA8P53708 1063 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 SNRPFP62306 86 aaKnown RBP20.87■□□□□ 0.93
COL13A1-201ENST00000354547 SCARA3Q6AZY7 606 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 TMEM270Q6UE05 265 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 AAASQ9NRG9 546 aa20.87■□□□□ 0.93
COL13A1-201ENST00000354547 AGTP01019 485 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 HLA-DRAP01903 254 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 ZBTB41Q5SVQ8 909 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 VSIG10LQ86VR7 867 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 CCDC197Q8NCU1 140 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 AGBL3Q8NEM8 1001 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 IPO4Q8TEX9 1081 aaKnown RBP20.86■□□□□ 0.93
COL13A1-201ENST00000354547 ZNF317Q96PQ6 595 aaPredicted RBP20.86■□□□□ 0.93
COL13A1-201ENST00000354547 LRRC19Q9H756 370 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 CD248Q9HCU0 757 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 STK32BQ9NY57 414 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 FSCN2O14926 492 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 HGSO14964 777 aaPredicted RBP20.86■□□□□ 0.93
COL13A1-201ENST00000354547 NBPF12Q5TAG4 269 aaPredicted RBP20.86■□□□□ 0.93
COL13A1-201ENST00000354547 EXOC3L1Q86VI1 746 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 ATP6V0A1Q93050 837 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 HVCN1Q96D96 273 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 CNOT7Q9UIV1 285 aaKnown RBP20.86■□□□□ 0.93
COL13A1-201ENST00000354547 LOXHD1Q8IVV2 1947 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 PTPRJQ12913 1337 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 C5orf60A6NFR6 353 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 LRRIQ4A6NIV6 560 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 PMM2O15305 246 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 RGS20O76081 388 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 UNGP13051 313 aaPredicted RBP20.86■□□□□ 0.93
COL13A1-201ENST00000354547 GBP1P32455 592 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 KAZNQ674X7 775 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 SEPT14Q6ZU15 432 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 SLC17A8Q8NDX2 589 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 FBXL18Q96ME1 805 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 TEPSINQ96N21 525 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 PCDHB4Q9Y5E5 795 aa20.86■□□□□ 0.93
COL13A1-201ENST00000354547 TP73O15350 636 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 SCTRP47872 440 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 HMGCS2P54868 508 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 TDRD10Q5VZ19 366 aaKnown RBP20.85■□□□□ 0.93
COL13A1-201ENST00000354547 MYPNQ86TC9 1320 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 GDAP1Q8TB36 358 aa20.85■□□□□ 0.93
COL13A1-201ENST00000354547 TMEM174Q8WUU8 243 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms