RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 USP8P40818 1118 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 JAM2P57087 298 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 ACTN3Q08043 901 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 BIRC3Q13489 604 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 TCERG1LQ5VWI1 586 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 TMC3Q7Z5M5 1100 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 DAAM2Q86T65 1068 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 LRRC71Q8N4P6 559 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 RDH13Q8NBN7 331 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 PLEKHO2Q8TD55 490 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 SLC35C1Q96A29 364 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 FAM84AQ96KN4 292 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 C16orf70Q9BSU1 422 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 VTA1Q9NP79 307 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 SUCLA2Q9P2R7 463 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 DDX20Q9UHI6 824 aaKnown RBP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 GABRQQ9UN88 632 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 SIP14410 1827 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 NOP56O00567 594 aaKnown RBP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 H2AFZP0C0S5 128 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 ZNF865P0CJ78 1059 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 ARL2P36404 184 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 CYP2J2P51589 502 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 SPRED3Q2MJR0 410 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 ODF2Q5BJF6 829 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 OLFML2BQ68BL8 750 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 RUFY4Q6ZNE9 571 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 H2AFVQ71UI9 128 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 SEC14L1Q92503 715 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 HES6Q96HZ4 224 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 HAPLN2Q9GZV7 340 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 ATP6V0A4Q9HBG4 840 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 OSGEPQ9NPF4 335 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 GCNT4Q9P109 453 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 TBX20Q9UMR3 447 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 NOVA2Q9UNW9 492 aaKnown RBP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 NR2E1Q9Y466 385 aa9.24□□□□□ -0.93
TRIM55-204ENST00000353317 MKI67P46013 3256 aaKnown RBP9.24□□□□□ -0.93
TRIM55-204ENST00000353317 A0A0A6YYK5 440 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 LOC102724159A0A0B4J2E5 919 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 DENND3A2RUS2 1198 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 LGALS2P05162 132 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 POLGP54098 1239 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 INHBEP58166 350 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 MAGOHP61326 146 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 PPP2R2AP63151 447 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 DLG4P78352 724 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 POU5F1Q01860 360 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 PWP2Q15269 919 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 OLIG1Q8TAK6 271 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 MAGOHBQ96A72 148 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 NCAPGQ9BPX3 1015 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 OSBPL7Q9BZF2 842 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 DPH5Q9H2P9 285 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 ST6GALNAC4Q9H4F1 302 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 SLITRK6Q9H5Y7 841 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 EMSYQ7Z589 1322 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 FAM170AA1A519 330 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 GOLGA8IPA6NC78 632 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 GOLGA8JA6NMD2 632 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 CA12O43570 354 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 MAFO75444 373 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 RASSF9O75901 435 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 GFPT2O94808 682 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 FGGP02679 453 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 HOXC6P09630 235 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 GALCP54803 685 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 DHX9Q08211 1270 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 TRIM32Q13049 653 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 DUSP28Q4G0W2 176 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 C1orf220Q5T0J3 134 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 PLPPR4Q7Z2D5 763 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 TRPV1Q8NER1 839 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 LNX1Q8TBB1 728 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 U2AF1L4Q8WU68 220 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 LMBR1Q8WVP7 490 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 MPHOSPH6Q99547 160 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 ABHD16BQ9H3Z7 469 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 ZFYVE28Q9HCC9 887 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 KMT5AQ9NQR1 393 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 GEMIN8Q9NWZ8 242 aaKnown RBP9.23□□□□□ -0.93
TRIM55-204ENST00000353317 ARHGAP28Q9P2N2 729 aa9.23□□□□□ -0.93
TRIM55-204ENST00000353317 IGKV6-21A0A0C4DH24 114 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 F8VZ95 297 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 CALUO43852 315 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 EVI5O60447 810 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 BUB1BO60566 1050 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 GH1P01241 217 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 ANXA13P27216 316 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SMTNP53814 917 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 PDE4CQ08493 712 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 CAPSQ13938 189 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 HIC1Q14526 733 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 AGBL2Q5U5Z8 902 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 DCAF12L1Q5VU92 463 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 VPS36Q86VN1 386 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SYCE1Q8N0S2 351 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 CCDC26Q8TAB7 109 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms