RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 CNGA1P29973 690 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 APOBEC3HQ6NTF7 200 aaKnown RBP19.17■□□□□ 0.66
CTSB-202ENST00000353047 FAM228AQ86W67 206 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 HSPH1Q92598 858 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 PHTF1Q9UMS5 762 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 USH1CQ9Y6N9 552 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 NCALDP61601 193 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 PKN2Q16513 984 aaKnown RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 LVRNQ6Q4G3 990 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 COL23A1Q86Y22 540 aaPredicted RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 RHPN2Q8IUC4 686 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 EPS8L1Q8TE68 723 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 PRMT6Q96LA8 375 aaPredicted RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 TMEM121Q9BTD3 319 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 GLIS2Q9BZE0 524 aaPredicted RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 DONSONQ9NYP3 566 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 TMEM59LQ9UK28 342 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 ZHX2Q9Y6X8 837 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 N4BP2Q86UW6 1770 aaPredicted RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 NFIBO00712 420 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 HSPA1LP34931 641 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 SREBF1P36956 1147 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 TFAMQ00059 246 aaKnown RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 KDSRQ06136 332 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 PPP2R5CQ13362 524 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 RRP1BQ14684 758 aaKnown RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 SMYD3Q9H7B4 428 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 TXLNGQ9NUQ3 528 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 C15orf41Q9Y2V0 281 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 CASZ1Q86V15 1759 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 C2orf71A6NGG8 1288 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 CDH16O75309 829 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 KRT4P19013 534 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 GCLCP48506 637 aaPredicted RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 PLCB4Q15147 1175 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 CYP4A22Q5TCH4 519 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 FAXCQ5TGI0 409 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 C6orf89Q6UWU4 347 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 C1orf186Q6ZWK4 172 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 TMEM143Q96AN5 459 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 CCDC124Q96CT7 223 aaKnown RBP19.16■□□□□ 0.66
CTSB-202ENST00000353047 GABBR1Q9UBS5 961 aa19.16■□□□□ 0.66
CTSB-202ENST00000353047 EME2A4GXA9 379 aaPredicted RBP19.15■□□□□ 0.66
CTSB-202ENST00000353047 GYG2O15488 501 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 SMARCA1P28370 1054 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 MMP13P45452 471 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 QARSP47897 775 aaKnown RBP19.15■□□□□ 0.66
CTSB-202ENST00000353047 ATL2Q8NHH9 583 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 GRHL1Q9NZI5 618 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 CFAP73A6NFT4 308 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 FAM47DPA6NHR8 397 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 TTC4O95801 387 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 TRPC3Q13507 836 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 ZRSR2Q15696 482 aaKnown RBP19.15■□□□□ 0.66
CTSB-202ENST00000353047 SWSAP1Q6NVH7 229 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 MTDHQ86UE4 582 aaKnown RBP19.15■□□□□ 0.66
CTSB-202ENST00000353047 MYLK2Q9H1R3 596 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 SPATS2LQ9NUQ6 558 aaKnown RBP19.15■□□□□ 0.66
CTSB-202ENST00000353047 NINJ2Q9NZG7 142 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 SEMA4DQ92854 862 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 CFAP57Q96MR6 1250 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 MAK16Q9BXY0 300 aaKnown RBP19.15■□□□□ 0.66
CTSB-202ENST00000353047 DLGAP2Q9P1A6 1054 aa19.15■□□□□ 0.66
CTSB-202ENST00000353047 DIS3Q9Y2L1 958 aaKnown RBP19.15■□□□□ 0.66
CTSB-202ENST00000353047 ADRB2P07550 413 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 MARK3P27448 753 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 SSTR1P30872 391 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 ANKRD20A2Q5SQ80 823 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 ANKRD20A1Q5TYW2 823 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 RASIP1Q5U651 963 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 LARGE2Q8N3Y3 721 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 PGM2Q96G03 612 aa19.14■□□□□ 0.66
CTSB-202ENST00000353047 CICQ96RK0 1608 aaPredicted RBP19.14■□□□□ 0.65
CTSB-202ENST00000353047 ECE2O60344 883 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 FASTKD3Q14CZ7 662 aaKnown RBP19.14■□□□□ 0.65
CTSB-202ENST00000353047 AGR3Q8TD06 166 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 RMDN3Q96TC7 470 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 TRAIPQ9BWF2 469 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 ZCWPW1Q9H0M4 648 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 ARMCX1Q9P291 453 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 ESRRAP11474 423 aaPredicted RBP19.14■□□□□ 0.65
CTSB-202ENST00000353047 GNA15P30679 374 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 POLGP54098 1239 aaPredicted RBP19.14■□□□□ 0.65
CTSB-202ENST00000353047 DNAJC24Q6P3W2 148 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 TTC8Q8TAM2 541 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 DEPTORQ8TB45 409 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 MCEEQ96PE7 176 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 LRRC4BQ9NT99 713 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 ZDHHC18Q9NUE0 388 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 PPARGC1AQ9UBK2 798 aaKnown RBP19.14■□□□□ 0.65
CTSB-202ENST00000353047 CHMP2BQ9UQN3 213 aa19.14■□□□□ 0.65
CTSB-202ENST00000353047 A0A0A6YYK5 440 aaPredicted RBP19.13■□□□□ 0.65
CTSB-202ENST00000353047 CFAP157Q5JU67 520 aa19.13■□□□□ 0.65
CTSB-202ENST00000353047 PRAMEF18Q5VWM3 479 aa19.13■□□□□ 0.65
CTSB-202ENST00000353047 SV2AQ7L0J3 742 aa19.13■□□□□ 0.65
CTSB-202ENST00000353047 RFX6Q8HWS3 928 aa19.13■□□□□ 0.65
CTSB-202ENST00000353047 ZDHHC14Q8IZN3 488 aa19.13■□□□□ 0.65
CTSB-202ENST00000353047 IL31RAQ8NI17 732 aa19.13■□□□□ 0.65
CTSB-202ENST00000353047 FAM161BQ96MY7 647 aa19.13■□□□□ 0.65
CTSB-202ENST00000353047 MKNK1Q9BUB5 465 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms