RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 OGTO15294 1046 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 NAMPTP43490 491 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 THOC5Q13769 683 aaKnown RBP14.54□□□□□ -0.08
SMC6-201ENST00000351948 MGAT5BQ3V5L5 792 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 TLK2Q86UE8 772 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 IPO11Q9UI26 975 aaKnown RBP14.54□□□□□ -0.08
SMC6-201ENST00000351948 FAN1Q9Y2M0 1017 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 FIS1Q9Y3D6 152 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 TRIM17Q9Y577 477 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 SMTNL2Q2TAL5 461 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 PCGF5Q86SE9 256 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 RNF10Q8N5U6 811 aaKnown RBP14.54□□□□□ -0.08
SMC6-201ENST00000351948 ACSF2Q96CM8 615 aaPredicted RBP14.54□□□□□ -0.08
SMC6-201ENST00000351948 STARD7Q9NQZ5 370 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 BCL9LQ86UU0 1499 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 GOLGA8KD6RF30 607 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 DPYSL4O14531 572 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 RNF40O75150 1001 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 ZNF484Q5JVG2 852 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 TRIM72Q6ZMU5 477 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 ARHGEF2Q92974 986 aaKnown RBP14.53□□□□□ -0.08
SMC6-201ENST00000351948 CYP39A1Q9NYL5 469 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 AMACRQ9UHK6 382 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 TRIM65Q6PJ69 517 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 TAS1R2Q8TE23 839 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
SMC6-201ENST00000351948 MKNK1Q9BUB5 465 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 CAPS2Q9BXY5 557 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 PPP1R12CQ9BZL4 782 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 EDEM3Q9BZQ6 932 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 PQBP1O60828 265 aaKnown RBP14.53□□□□□ -0.08
SMC6-201ENST00000351948 CXCL8P10145 99 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 PPIL2Q13356 520 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 AFAP1L2Q8N4X5 818 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 BCAS4Q8TDM0 211 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 KLRG1Q96E93 195 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 INTS9Q9NV88 658 aaKnown RBP14.53□□□□□ -0.08
SMC6-201ENST00000351948 DPP3Q9NY33 737 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 NOVA2Q9UNW9 492 aaKnown RBP14.53□□□□□ -0.08
SMC6-201ENST00000351948 ATP11BQ9Y2G3 1177 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 WNT7AO00755 349 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 KRT7P08729 469 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 STAG3L1P0CL83 205 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 RAP1GAPP47736 663 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 KCNA1Q09470 495 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 GRIK4Q16099 956 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 ACCSLQ4AC99 568 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 GIMAP7Q8NHV1 300 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 ATP8B4Q8TF62 1192 aa14.53□□□□□ -0.08
SMC6-201ENST00000351948 LBHD1Q9BQE6 289 aaPredicted RBP14.53□□□□□ -0.08
SMC6-201ENST00000351948 IL18RAPO95256 599 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 GNL1P36915 607 aaPredicted RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 GARSP41250 739 aaKnown RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 SULT1E1P49888 294 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 GPS1Q13098 491 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 SLMAPQ14BN4 828 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 VEPH1Q14D04 833 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 RPS6KA2Q15349 733 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 CCDC60Q8IWA6 550 aaPredicted RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 DHX38Q92620 1227 aaKnown RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 C17orf75Q9HAS0 396 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 ANO9A1A5B4 782 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 CCDC188H7C350 402 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 DFFAO00273 331 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 SLC26A4O43511 780 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 CD4P01730 458 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 UBA1P22314 1058 aaKnown RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 ACVR2BQ13705 512 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 CASP8Q14790 479 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 C1orf131Q8NDD1 294 aaKnown RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 MCUR1Q96AQ8 359 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 ZNF512Q96ME7 567 aaPredicted RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 ADAM33Q9BZ11 813 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 BLOC1S4Q9NUP1 217 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 ABI2Q9NYB9 513 aaPredicted RBP14.52□□□□□ -0.08
SMC6-201ENST00000351948 PCDHB2Q9Y5E7 798 aa14.52□□□□□ -0.08
SMC6-201ENST00000351948 CCDC151A5D8V7 595 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 STRNO43815 780 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 TOM1L1O75674 476 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 AKAP5P24588 427 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 PON1P27169 355 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 CCDC62Q6P9F0 684 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 BHMTQ93088 406 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 KLC2Q9H0B6 622 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 ABHD16BQ9H3Z7 469 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 PRRG1O14668 218 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 RASGRF2O14827 1237 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.09
SMC6-201ENST00000351948 CENPUQ71F23 418 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 SH3BP5LQ7L8J4 393 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 TTC39CQ8N584 583 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 SLC5A5Q92911 643 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 ZBTB45Q96K62 511 aaPredicted RBP14.52□□□□□ -0.09
SMC6-201ENST00000351948 WDR18Q9BV38 432 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 FSD1LQ9BXM9 530 aa14.52□□□□□ -0.09
SMC6-201ENST00000351948 PFDN6O15212 129 aa14.51□□□□□ -0.09
SMC6-201ENST00000351948 TROVE2P10155 538 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMC6-201ENST00000351948 GHRP10912 638 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms