RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CRYGNQ8WXF5 182 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 OLFM3Q96PB7 478 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CENPKQ9BS16 269 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 TUBB6Q9BUF5 446 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 POLR3CQ9BUI4 534 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CADM1Q9BY67 442 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 MIS12Q9H081 205 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 MMADHCQ9H3L0 296 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CYLDQ9NQC7 956 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 GALNT8Q9NY28 637 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 GCNT4Q9P109 453 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CIDEBQ9UHD4 219 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ZFP69BQ9UJL9 534 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 BLOC1S6Q9UL45 172 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 COG5Q9UP83 839 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 NAALADL1Q9UQQ1 740 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 UMODL1Q5DID0 1318 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 PRPF4O43172 522 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 MED24O75448 989 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 AKAP3O75969 853 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 KRT36O76013 467 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 CYP1A1P04798 512 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 ABCB4P21439 1286 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 PSMC2P35998 433 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 CAV1Q03135 178 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 SPIRE1Q08AE8 756 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 NR1H3Q13133 447 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 DNAJC3Q13217 504 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 MTA1Q13330 715 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 PDK4Q16654 411 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 WDR72Q3MJ13 1102 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 LIN52Q52LA3 116 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 TAF1BQ53T94 588 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 ACBD5Q5T8D3 534 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 DSTYKQ6XUX3 929 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 CCDC125Q86Z20 511 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 ETNPPLQ8TBG4 499 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 DENND1AQ8TEH3 1009 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 CCDC17Q96LX7 622 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 ANO3Q9BYT9 981 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 THAP2Q9H0W7 228 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 ASCC2Q9H1I8 757 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 WNT8AQ9H1J5 351 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 LRRC19Q9H756 370 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 SUDS3Q9H7L9 328 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 PREBQ9HCU5 417 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 SEL1LQ9UBV2 794 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 ASTN1O14525 1302 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 SPATA31A6Q5VVP1 1343 aa10.98□□□□□ -0.65
CHRNA1-202ENST00000348749 FOXO6A8MYZ6 492 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 TBX10O75333 385 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CETPP11597 493 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 TPP2P29144 1249 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 HOXD13P35453 343 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CHKAP35790 457 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CDK7P50613 346 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 SPARCL1Q14515 664 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 STAT4Q14765 748 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 ZC2HC1CQ53FD0 456 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 TMEM63BQ5T3F8 832 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 C1QTNF12Q5T7M4 302 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 SYDE1Q6ZW31 735 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 STXBP4Q6ZWJ1 553 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 ZNF365Q70YC5 407 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 SFR1Q86XK3 245 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CATSPER3Q86XQ3 398 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 SLC13A5Q86YT5 568 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 SYCP3Q8IZU3 236 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 DCAF4Q8WV16 495 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 KRT35Q92764 455 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 RBM17Q96I25 401 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 IWS1Q96ST2 819 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 REEP2Q9BRK0 252 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 BTBD10Q9BSF8 475 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 KRT82Q9NSB4 513 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 FRMPD4Q14CM0 1322 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 NPHP3-ACAD11A0A0J9YXS1 232 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 A8MXQ7 604 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 THAP12O43422 761 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 TBCAO75347 108 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CCDC166P0CW27 439 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 AKR1B1P15121 316 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CIITAP33076 1130 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 MYBPC2Q14324 1141 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 GJB7Q6PEY0 223 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 HS2ST1Q7LGA3 356 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 NLRP9Q7RTR0 991 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CLNKQ7Z7G1 428 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 RELL1Q8IUW5 271 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 KBTBD2Q8IY47 623 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 LRRC47Q8N1G4 583 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 MAML1Q92585 1016 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 SNF8Q96H20 258 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 CCDC77Q9BR77 488 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 STK32BQ9NY57 414 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 NINJ2Q9NZG7 142 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
CHRNA1-202ENST00000348749 ZNF510Q9Y2H8 683 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms