RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SMG5Q9UPR3 1016 aaKnown RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 AKAP3O75969 853 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 FSBPO95073 299 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 PDHA1P08559 390 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 TBXAS1P24557 533 aaPredicted RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 ARSEP51690 589 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 CXCL9Q07325 125 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 TMC3Q7Z5M5 1100 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 SLC13A5Q86YT5 568 aaPredicted RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 IRF2BP1Q8IU81 584 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 CNPY4Q8N129 248 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 PRMT6Q96LA8 375 aaPredicted RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 YIPF3Q9GZM5 350 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 SEPT10Q9P0V9 454 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 IGF2BP3O00425 579 aaKnown RBP eCLIP15.63■□□□□ 0.09
NUP50-201ENST00000347635 KRT37O76014 449 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 YWHABP31946 246 aaKnown RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 TNFAIP2Q03169 654 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 P3H1Q32P28 736 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 C3orf67Q6ZVT6 689 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 ZC3H18Q86VM9 953 aaKnown RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 DNAAF5Q86Y56 855 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 ABI1Q8IZP0 508 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 HSPH1Q92598 858 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 RBM15Q96T37 977 aaKnown RBP eCLIP15.63■□□□□ 0.09
NUP50-201ENST00000347635 NALCNQ8IZF0 1738 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 FAM47DPA6NHR8 397 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 TOM1L1O75674 476 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 ITGA4P13612 1032 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 HNRNPH3P31942 346 aaKnown RBP15.62■□□□□ 0.09
NUP50-201ENST00000347635 ITGA8P53708 1063 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 C9orf131Q5VYM1 1079 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 SAMD7Q7Z3H4 446 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 MIPOL1Q8TD10 442 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 GEMIN8Q9NWZ8 242 aaKnown RBP15.62■□□□□ 0.09
NUP50-201ENST00000347635 LRRC37A3O60309 1634 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 ARFIP2P53365 341 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 PTENP60484 403 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 COPS2P61201 443 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 KYNUQ16719 465 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 ATP11CQ8NB49 1132 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 RNF169Q8NCN4 708 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 MTMR9Q96QG7 549 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 PARVAQ9NVD7 372 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 CASZ1Q86V15 1759 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 ARL1P40616 181 aaPredicted RBP15.62■□□□□ 0.09
NUP50-201ENST00000347635 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
NUP50-201ENST00000347635 KIF2BQ8N4N8 673 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 FAF2Q96CS3 445 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 NUDT12Q9BQG2 462 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 DDX56Q9NY93 547 aaKnown RBP15.62■□□□□ 0.09
NUP50-201ENST00000347635 PCDHA10Q9Y5I2 948 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 POLE2P56282 527 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 AGGF1Q8N302 714 aaeCLIP15.62■□□□□ 0.09
NUP50-201ENST00000347635 EIF1ADQ8N9N8 165 aaKnown RBP15.62■□□□□ 0.09
NUP50-201ENST00000347635 CHORDC1Q9UHD1 332 aaPredicted RBP15.62■□□□□ 0.09
NUP50-201ENST00000347635 PPP1R9AQ9ULJ8 1098 aa15.62■□□□□ 0.09
NUP50-201ENST00000347635 PRPSAP2O60256 369 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 PHKA2P46019 1235 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 TMPRSS15P98073 1019 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 SNRNP35Q16560 246 aaKnown RBP15.61■□□□□ 0.09
NUP50-201ENST00000347635 GEN1Q17RS7 908 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 MREGQ8N565 214 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 C4orf32Q8N8J7 132 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 C9orf72Q96LT7 481 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 USH1CQ9Y6N9 552 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 GTPBP10A4D1E9 387 aaKnown RBP15.61■□□□□ 0.09
NUP50-201ENST00000347635 SPECC1L-ADORA2AF8WAN1 911 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 NXNQ6DKJ4 435 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 CRLF3Q8IUI8 442 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 CPA5Q8WXQ8 436 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 ZFYVE28Q9HCC9 887 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 PARP4Q9UKK3 1724 aaKnown RBP15.61■□□□□ 0.09
NUP50-201ENST00000347635 FOXN3O00409 490 aaPredicted RBP15.61■□□□□ 0.09
NUP50-201ENST00000347635 ZNF394Q53GI3 561 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 PPARGC1AQ9UBK2 798 aaKnown RBP15.61■□□□□ 0.09
NUP50-201ENST00000347635 SSX2IPQ9Y2D8 614 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 GSTA1P08263 222 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 GHRP10912 638 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 CDC42EP1Q00587 391 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 FBXO25Q8TCJ0 367 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 DEPDC1BQ8WUY9 529 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 BAP1Q92560 729 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 TMEM117Q9H0C3 514 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 IFT122Q9HBG6 1241 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 TRAF3IP3Q9Y228 551 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 LMO7Q8WWI1 1683 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 ZWINTO95229 277 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 COBLL1Q53SF7 1204 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 BTNL9Q6UXG8 535 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 LRRC55Q6ZSA7 311 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 OSBPL1AQ9BXW6 950 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 STRIP2Q9ULQ0 834 aa15.61■□□□□ 0.09
NUP50-201ENST00000347635 SPEF2Q9C093 1822 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 RARGP13631 454 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 CENPCQ03188 943 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 METTL23Q86XA0 190 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 GABPB2Q8TAK5 448 aaPredicted RBP15.6■□□□□ 0.09
NUP50-201ENST00000347635 PSPC1Q8WXF1 523 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms