RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 ROR1Q01973 937 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 CACNB2Q08289 660 aaPredicted RBP11.09□□□□□ -0.63
SMG7-201ENST00000347615 BIRC2Q13490 618 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 TEX2Q8IWB9 1127 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 ADA2Q9NZK5 511 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 ARHGEF28Q8N1W1 1705 aaKnown RBP11.09□□□□□ -0.63
SMG7-201ENST00000347615 NSUN2Q08J23 767 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMG7-201ENST00000347615 PRPSAP1Q14558 356 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 TTMPQ5BVD1 217 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 C3orf62Q6ZUJ4 267 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 UBA3Q8TBC4 463 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 TMBIM4Q9HC24 238 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 IP6K2Q9UHH9 426 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 KIAA1210Q9ULL0 1709 aa11.09□□□□□ -0.63
SMG7-201ENST00000347615 TISP43B9A030 160 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 ZWINTO95229 277 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 SYF2O95926 243 aaKnown RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 COILP38432 576 aaPredicted RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 SATB1Q01826 763 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 ZBTB41Q5SVQ8 909 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 TMEM154Q6P9G4 183 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 RASSF3Q86WH2 238 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 TRIML2Q8N7C3 387 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 THTPAQ9BU02 230 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 UNC45AQ9H3U1 944 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 KCNG1Q9UIX4 513 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 GOLGA8CPA6NN73 597 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 HMGCS2P54868 508 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 PSMC5P62195 406 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 IFI35P80217 286 aaPredicted RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 KDM7AQ6ZMT4 941 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 CBWD2Q8IUF1 395 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 WDR75Q8IWA0 830 aaKnown RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 ALKBH8Q96BT7 664 aaKnown RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 CCDC68Q9H2F9 335 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 L3MBTL1Q9Y468 752 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 GNGT2O14610 69 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 PPP1R12AO14974 1030 aaPredicted RBP11.08□□□□□ -0.64
SMG7-201ENST00000347615 ASNSP08243 561 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 MAGEA4P43358 317 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 JAK3P52333 1124 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 BTKQ06187 659 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 KCNMA1Q12791 1236 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 CYTH1Q15438 398 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 MAPK6Q16659 721 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 LRIG3Q6UXM1 1119 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 RSPH3Q86UC2 560 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 RPS6KC1Q96S38 1066 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 GJB6O95452 261 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 RANBP1P43487 201 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.645e-6■■■□□ 14.9
SMG7-201ENST00000347615 PRUNE1Q86TP1 453 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 FAM71DQ8N9W8 422 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 ZSWIM2Q8NEG5 633 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 TMEM39BQ9GZU3 492 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
SMG7-201ENST00000347615 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
SMG7-201ENST00000347615 LRRC71Q8N4P6 559 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 SIK2Q9H0K1 926 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 RAB6BQ9NRW1 208 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 PARVAQ9NVD7 372 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
SMG7-201ENST00000347615 H3BRJ5 948 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 APOEP02649 317 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 ARP10275 920 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 BCAR1P56945 870 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 DCPSQ96C86 337 aaKnown RBP11.07□□□□□ -0.64
SMG7-201ENST00000347615 TSSK1BQ9BXA7 367 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 CTNNAL1Q9UBT7 734 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 FEM1BQ9UK73 627 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 OATP04181 439 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 ERVK-9P63128 1117 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 EPHA7Q15375 998 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 SF3B3Q15393 1217 aaKnown RBP11.07□□□□□ -0.64
SMG7-201ENST00000347615 ANO4Q32M45 955 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 TMTC4Q5T4D3 741 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 DAB2IPQ5VWQ8 1189 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 PDZD4Q76G19 769 aaPredicted RBP11.07□□□□□ -0.64
SMG7-201ENST00000347615 TRIM42Q8IWZ5 723 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 ACER1Q8TDN7 264 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 PRCCQ92733 491 aaPredicted RBP11.07□□□□□ -0.64
SMG7-201ENST00000347615 TLR10Q9BXR5 811 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 STOML1Q9UBI4 398 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 BCAP29Q9UHQ4 241 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
SMG7-201ENST00000347615 FGFR2P21802 821 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 CIITAP33076 1130 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 STX1BP61266 288 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 GRIK5Q16478 980 aa11.07□□□□□ -0.64
SMG7-201ENST00000347615 CREG2Q8IUH2 290 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms