RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 WDR60Q8WVS4 1066 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 NR1H4Q96RI1 486 aaPredicted RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 NUP85Q9BW27 656 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 CHRNA3P32297 505 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 TMPRSS15P98073 1019 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 R3HDM1Q15032 1099 aaKnown RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 TRIP10Q15642 601 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 ACCSLQ4AC99 568 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 CASKIN2Q8WXE0 1202 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 CDKL2Q92772 493 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 RPS6KC1Q96S38 1066 aa16.37■□□□□ 0.21
SRPK1-201ENST00000346162 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
SRPK1-201ENST00000346162 SLC37A4O43826 429 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 CRCPO75575 148 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 SLC9A1P19634 815 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 MRPS15P82914 257 aaKnown RBP16.36■□□□□ 0.21
SRPK1-201ENST00000346162 BBS9Q3SYG4 887 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 WDR75Q8IWA0 830 aaKnown RBP16.36■□□□□ 0.21
SRPK1-201ENST00000346162 FBXL13Q8NEE6 735 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 CCT6BQ92526 530 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 HEXIM2Q96MH2 286 aaKnown RBP16.36■□□□□ 0.21
SRPK1-201ENST00000346162 ASCC2Q9H1I8 757 aaPredicted RBP16.36■□□□□ 0.21
SRPK1-201ENST00000346162 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 DDX28Q9NUL7 540 aaKnown RBP16.36■□□□□ 0.21
SRPK1-201ENST00000346162 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 MYBP10242 640 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 GSTT1P30711 240 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 DHX34Q14147 1143 aaKnown RBP16.36■□□□□ 0.21
SRPK1-201ENST00000346162 GPR162Q16538 588 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 TMEM259Q4ZIN3 620 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 DARS2Q6PI48 645 aaKnown RBP16.36■□□□□ 0.21
SRPK1-201ENST00000346162 CAVIN3Q969G5 261 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 MTBPQ96DY7 904 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 TRIM51Q9BSJ1 452 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 FAM129AQ9BZQ8 928 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 PITPNM2Q9BZ72 1349 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 A0A1W2PQJ5 194 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 FAM167AQ96KS9 214 aa16.36■□□□□ 0.21
SRPK1-201ENST00000346162 SLC26A4O43511 780 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 KDSRQ06136 332 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 PDIK1LQ8N165 341 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 MAML3Q96JK9 1138 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 ATP11BQ9Y2G3 1177 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 PFASO15067 1338 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 TOM1L1O75674 476 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 YWHABP31946 246 aaKnown RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 PDE1BQ01064 536 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 THOC5Q13769 683 aaKnown RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 KIF22Q14807 665 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 CWF19L1Q69YN2 538 aaKnown RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 IRGCQ6NXR0 463 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 CRLF3Q8IUI8 442 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 HDAC7Q8WUI4 952 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 STK33Q9BYT3 514 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 UBN1Q9NPG3 1134 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 TJP3O95049 919 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 PSMA2P25787 234 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 FMO5P49326 533 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 ADARP55265 1226 aaKnown RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 DMPKQ09013 629 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 AP1B1Q10567 949 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 IFRD2Q12894 506 aaPredicted RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 LONRF1Q17RB8 773 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 RBBP8NLQ8NC74 664 aaPredicted RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 SNX25Q9H3E2 840 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 DUSP10Q9Y6W6 482 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 FAM205AQ6ZU69 1335 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 GALCP54803 685 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 GRB10Q13322 594 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 RARS2Q5T160 578 aaKnown RBP16.35■□□□□ 0.21
SRPK1-201ENST00000346162 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 MTRQ99707 1265 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 AGPAT1Q99943 283 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 ZNF302Q9NR11 478 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 GGA2Q9UJY4 613 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 PLAGL2Q9UPG8 496 aa16.35■□□□□ 0.21
SRPK1-201ENST00000346162 RBM41Q96IZ5 413 aaKnown RBP16.34■□□□□ 0.21
SRPK1-201ENST00000346162 ACAD9Q9H845 621 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 NPHS2Q9NP85 383 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 SAYSD1Q9NPB0 183 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 OLFML3Q9NRN5 406 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 BCL9O00512 1426 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 TTC4O95801 387 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 HIC1Q14526 733 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 EARS2Q5JPH6 523 aaKnown RBP16.34■□□□□ 0.21
SRPK1-201ENST00000346162 MPP4Q96JB8 637 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 POLR3FQ9H1D9 316 aaPredicted RBP16.34■□□□□ 0.21
SRPK1-201ENST00000346162 RPAP3Q9H6T3 665 aaPredicted RBP16.34■□□□□ 0.21
SRPK1-201ENST00000346162 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 GALNT8Q9NY28 637 aa16.34■□□□□ 0.21
SRPK1-201ENST00000346162 ZNF229Q9UJW7 825 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms