RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 PAMP19021 973 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SMARCA1P28370 1054 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 IFNA8P32881 189 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 BCAP31P51572 246 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CBX3Q13185 183 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SUZ12Q15022 739 aaKnown RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 GLYCTKQ8IVS8 523 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 C3orf20Q8ND61 904 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TTC8Q8TAM2 541 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 RIN3Q8TB24 985 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 RASSF5Q8WWW0 418 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 HPS1Q92902 700 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TNIP3Q96KP6 325 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 BEGAINQ9BUH8 593 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ASPSCR1Q9BZE9 553 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TMEM260Q9NX78 707 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 PRPF4O43172 522 aaKnown RBP eCLIP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 HOXB7P09629 217 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TRIM49P0CI25 452 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TRIM49CP0CI26 452 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ANXA13P27216 316 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CHRNA3P32297 505 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 STAT3P40763 770 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 NUMBP49757 651 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 USP14P54578 494 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SPIRE1Q08AE8 756 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CUL4AQ13619 759 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 UBE3CQ15386 1083 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ARL13BQ3SXY8 428 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 C6orf10Q5SRN2 563 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 THEMIS2Q5TEJ8 643 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 BNIPLQ7Z465 357 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF280BQ86YH2 543 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 DPF2Q92785 391 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 KIF14Q15058 1648 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 KDM5BQ9UGL1 1544 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 IFT140Q96RY7 1462 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SYNGAP1Q96PV0 1343 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TPPPO94811 219 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 APBA3O96018 575 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SERPIND1P05546 499 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CYP2D6P10635 497 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 NAT1P18440 290 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ALDH1B1P30837 517 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ARSEP51690 589 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 PSMC5P62195 406 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 STX5Q13190 355 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 MED21Q13503 144 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 RASGRF1Q13972 1273 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TRIP10Q15642 601 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CDC37Q16543 378 aaPredicted RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 STAG2Q8N3U4 1231 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 MINDY2Q8NBR6 621 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 COG1Q8WTW3 980 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CAPSLQ8WWF8 208 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 EME1Q96AY2 570 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 C9orf72Q96LT7 481 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SH2D3AQ9BRG2 576 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 RANBP17Q9H2T7 1088 aaKnown RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 C20orf96Q9NUD7 363 aaPredicted RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 LIMA1Q9UHB6 759 aaKnown RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ZFYVE9O95405 1425 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 FAM196BA6NMK8 535 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 BMP3P12645 472 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 POLR2EP19388 210 aaKnown RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 IL10P22301 178 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ADORA2BP29275 332 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SERPINB10P48595 397 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CCT3P49368 545 aaKnown RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 DRAP1Q14919 205 aaPredicted RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CCNG2Q16589 344 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TBRG1Q3YBR2 411 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ACCSLQ4AC99 568 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ASPRV1Q53RT3 343 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ARHGAP27Q6ZUM4 889 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 LRRC49Q8IUZ0 686 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SAMD3Q8N6K7 520 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TBATAQ96M53 351 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ACAP3Q96P50 834 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 CCT8L2Q96SF2 557 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SPON2Q9BUD6 331 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ROGDIQ9GZN7 287 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 DHX35Q9H5Z1 703 aaKnown RBP6.91□□□□□ -1.3
PCDH18-201ENST00000344876 USE1Q9NZ43 259 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 SPATA7Q9P0W8 599 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 TMEM5Q9Y2B1 443 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 ADGRG1Q9Y653 693 aa6.91□□□□□ -1.3
PCDH18-201ENST00000344876 WDR17Q8IZU2 1322 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 M0QYV0 167 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 SEMA3EO15041 775 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 TPST1O60507 370 aa6.9□□□□□ -1.3
PCDH18-201ENST00000344876 CLASP2O75122 1294 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms