RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 EME2A4GXA9 379 aaPredicted RBP23.86■■□□□ 1.41
TRIM28-202ENST00000341753 ENO4A6NNW6 628 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 UNC5CO95185 931 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 IVDP26440 423 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 DNAJC3Q13217 504 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 EPC2Q52LR7 807 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 C1orf220Q5T0J3 134 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 CYP4F22Q6NT55 531 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 LLGL2Q6P1M3 1020 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 CNKSR1Q969H4 720 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 HAO1Q9UJM8 370 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 ANAPC5Q9UJX4 755 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 FOSP01100 380 aaPredicted RBP23.86■■□□□ 1.41
TRIM28-202ENST00000341753 RASA3Q14644 834 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 MTFR1Q15390 333 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 STXBP4Q6ZWJ1 553 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 VSIG1Q86XK7 387 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 DAW1Q8N136 415 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 C12orf50Q8NA57 414 aaPredicted RBP23.86■■□□□ 1.41
TRIM28-202ENST00000341753 MAGEB18Q96M61 343 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.86■■□□□ 1.41
TRIM28-202ENST00000341753 TUFT1Q9NNX1 390 aa23.86■■□□□ 1.41
TRIM28-202ENST00000341753 SATB1Q01826 763 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 HP1BP3Q5SSJ5 553 aaPredicted RBP23.85■■□□□ 1.41
TRIM28-202ENST00000341753 MIS18BP1Q6P0N0 1132 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 INTS8Q75QN2 995 aaKnown RBP23.85■■□□□ 1.41
TRIM28-202ENST00000341753 YIPF3Q9GZM5 350 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 SLCO1B3Q9NPD5 702 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 STK24Q9Y6E0 443 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 GAS7O60861 476 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 CCNB1P14635 433 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 ATF2P15336 505 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 ITIH2P19823 946 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 TMEM63BQ5T3F8 832 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 DHX38Q92620 1227 aaKnown RBP23.85■■□□□ 1.41
TRIM28-202ENST00000341753 C10orf71Q711Q0 1435 aa23.85■■□□□ 1.41
TRIM28-202ENST00000341753 PSMD10O75832 226 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 WDR4P57081 412 aaKnown RBP23.84■■□□□ 1.41
TRIM28-202ENST00000341753 CETN1Q12798 172 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 ZNF449Q6P9G9 518 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 ARHGEF18Q6ZSZ5 1173 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 FBF1Q8TES7 1133 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 SLC5A5Q92911 643 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 MRRFQ96E11 262 aaKnown RBP23.84■■□□□ 1.41
TRIM28-202ENST00000341753 RASA4BC9J798 803 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 RASA4O43374 803 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 GRIK3Q13003 919 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 GMCL1P1Q8NEA9 526 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 C7orf43Q8WVR3 580 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 GMCL1Q96IK5 515 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 ANAPC7Q9UJX3 599 aa23.84■■□□□ 1.41
TRIM28-202ENST00000341753 GSTTP1A0A1W2PQM5 241 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 H0Y3Z8 333 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 FSCN2O14926 492 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 CYP1A2P05177 515 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 RFX1P22670 979 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 RNF43Q68DV7 783 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 TMEM117Q9H0C3 514 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 ARHGEF35A5YM69 484 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 MTA2O94776 668 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 RRM1P23921 792 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 TCEAL1Q15170 157 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 CDCA2Q69YH5 1023 aaPredicted RBP23.83■■□□□ 1.41
TRIM28-202ENST00000341753 STYK1Q6J9G0 422 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 CAPN12Q6ZSI9 719 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 SEMA4DQ92854 862 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 CCDC127Q96BQ5 260 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 FAM84AQ96KN4 292 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 PLCD4Q9BRC7 762 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 UNC45AQ9H3U1 944 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 SEL1LQ9UBV2 794 aa23.83■■□□□ 1.41
TRIM28-202ENST00000341753 MYBL1P10243 752 aa23.83■■□□□ 1.4
TRIM28-202ENST00000341753 MXI1P50539 228 aa23.83■■□□□ 1.4
TRIM28-202ENST00000341753 PRELPP51888 382 aa23.83■■□□□ 1.4
TRIM28-202ENST00000341753 STRN3Q13033 797 aa23.83■■□□□ 1.4
TRIM28-202ENST00000341753 FAM71AQ8IYT1 594 aa23.83■■□□□ 1.4
TRIM28-202ENST00000341753 LXNQ9BS40 222 aa23.83■■□□□ 1.4
TRIM28-202ENST00000341753 MRIQ9BWK5 157 aa23.83■■□□□ 1.4
TRIM28-202ENST00000341753 GM2AP17900 193 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 ARMC2Q8NEN0 867 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 NAF1Q96HR8 494 aaKnown RBP23.82■■□□□ 1.4
TRIM28-202ENST00000341753 NACC1Q96RE7 527 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 OSBPL1AQ9BXW6 950 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 GLIS2Q9BZE0 524 aaPredicted RBP23.82■■□□□ 1.4
TRIM28-202ENST00000341753 CHKBQ9Y259 395 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 ARP10275 920 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 CYP11B1P15538 503 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 BLMHQ13867 455 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 GRIPAP1Q4V328 841 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 MORC4Q8TE76 937 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 GTF3C4Q9UKN8 822 aa23.82■■□□□ 1.4
TRIM28-202ENST00000341753 GZMAP12544 262 aa23.81■■□□□ 1.4
TRIM28-202ENST00000341753 GJC1P36383 396 aa23.81■■□□□ 1.4
TRIM28-202ENST00000341753 PTK6Q13882 451 aa23.81■■□□□ 1.4
TRIM28-202ENST00000341753 CC2D2BQ6DHV5 1058 aa23.81■■□□□ 1.4
TRIM28-202ENST00000341753 FLAD1Q8NFF5 587 aa23.81■■□□□ 1.4
TRIM28-202ENST00000341753 ZNF483Q8TF39 744 aaPredicted RBP23.81■■□□□ 1.4
TRIM28-202ENST00000341753 KIAA1683Q9H0B3 1180 aa23.81■■□□□ 1.4
TRIM28-202ENST00000341753 FBXO28Q9NVF7 368 aa23.81■■□□□ 1.4
TRIM28-202ENST00000341753 UBE4BO95155 1302 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms