RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 JAMLQ86YT9 394 aa21.54■■□□□ 1.04
SPG7-202ENST00000341316 CNOT8Q9UFF9 292 aaKnown RBP21.54■■□□□ 1.04
SPG7-202ENST00000341316 GOLGA6L10A6NI86 522 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 ZC3H11AO75152 810 aaKnown RBP eCLIP21.53■■□□□ 1.04
SPG7-202ENST00000341316 VNN1O95497 513 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 HLA-DRAP01903 254 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 CTNNA2P26232 953 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 CTNNA1P35221 906 aaKnown RBP21.53■■□□□ 1.04
SPG7-202ENST00000341316 STRN3Q13033 797 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 SCARA3Q6AZY7 606 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 UBLCP1Q8WVY7 318 aaPredicted RBP21.53■■□□□ 1.04
SPG7-202ENST00000341316 TARS2Q9BW92 718 aaKnown RBP21.53■■□□□ 1.04
SPG7-202ENST00000341316 TRIM7Q9C029 511 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 C1orf112Q9NSG2 853 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 ZDHHC18Q9NUE0 388 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 SOWAHBA6NEL2 793 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 SPOPO43791 374 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 PHF2O75151 1096 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 KIAA0754O94854 1291 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 UNGP13051 313 aaPredicted RBP21.53■■□□□ 1.04
SPG7-202ENST00000341316 DHX9Q08211 1270 aaKnown RBP21.53■■□□□ 1.04
SPG7-202ENST00000341316 ENOSF1Q7L5Y1 443 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 NLRP14Q86W24 1093 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 FNBP1Q96RU3 617 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 NIFKQ9BYG3 293 aaKnown RBP21.53■■□□□ 1.04
SPG7-202ENST00000341316 RAB17Q9H0T7 212 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 LRRC4CQ9HCJ2 640 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 UVRAGQ9P2Y5 699 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 PCDHA3Q9Y5H8 950 aa21.53■■□□□ 1.04
SPG7-202ENST00000341316 MYH9P35579 1960 aaKnown RBP21.52■■□□□ 1.04
SPG7-202ENST00000341316 MEFVO15553 781 aaPredicted RBP21.52■■□□□ 1.04
SPG7-202ENST00000341316 MYZAPP0CAP1 466 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 NAMPTP43490 491 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 GTF2A1P52655 376 aaPredicted RBP21.52■■□□□ 1.04
SPG7-202ENST00000341316 DRP2Q13474 957 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 PPP2R5EQ16537 467 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 LLGL2Q6P1M3 1020 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 PHLDB2Q86SQ0 1253 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 SPATS2Q86XZ4 545 aaKnown RBP21.52■■□□□ 1.04
SPG7-202ENST00000341316 DEPTORQ8TB45 409 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 MYCBPAPQ8TBZ2 947 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 CCT8L2Q96SF2 557 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 KIAA1586Q9HCI6 787 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 FBXO40Q9UH90 709 aa21.52■■□□□ 1.04
SPG7-202ENST00000341316 K7ERI5 159 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 KIAA0391O15091 583 aaKnown RBP21.52■■□□□ 1.03
SPG7-202ENST00000341316 FARP2O94887 1054 aaPredicted RBP21.52■■□□□ 1.03
SPG7-202ENST00000341316 SEZ6Q53EL9 994 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 C2CD6Q53TS8 623 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 GPC2Q8N158 579 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 OTUD6BQ8N6M0 293 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 MORC4Q8TE76 937 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 CPA5Q8WXQ8 436 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 MAGOHBQ96A72 148 aaKnown RBP21.52■■□□□ 1.03
SPG7-202ENST00000341316 TXLNGYQ9BZA5 131 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 MAF1Q9H063 256 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 APOBEC3GQ9HC16 384 aaKnown RBP21.52■■□□□ 1.03
SPG7-202ENST00000341316 ANKFY1Q9P2R3 1169 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 SNX24Q9Y343 169 aa21.52■■□□□ 1.03
SPG7-202ENST00000341316 FAM187AA6NFU0 413 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 TTLL13PA6NNM8 815 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 MYO1FO00160 1098 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 PIGRP01833 764 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 CFHP08603 1231 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 PIK3CAP42336 1068 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 PPARDQ03181 441 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 DHX34Q14147 1143 aaKnown RBP21.51■■□□□ 1.03
SPG7-202ENST00000341316 LLGL1Q15334 1064 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 SIX1Q15475 284 aaPredicted RBP21.51■■□□□ 1.03
SPG7-202ENST00000341316 CLUL1Q15846 466 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 ZDHHC24Q6UX98 284 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 SUGP1Q8IWZ8 645 aaKnown RBP21.51■■□□□ 1.03
SPG7-202ENST00000341316 SLC7A3Q8WY07 619 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 PAGR1Q9BTK6 254 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 RBAKQ9NYW8 714 aaPredicted RBP21.51■■□□□ 1.03
SPG7-202ENST00000341316 CAPN7Q9Y6W3 813 aa21.51■■□□□ 1.03
SPG7-202ENST00000341316 ACO1P21399 889 aaKnown RBP21.5■■□□□ 1.03
SPG7-202ENST00000341316 BIRC3Q13489 604 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 TARBP2Q15633 366 aaKnown RBP21.5■■□□□ 1.03
SPG7-202ENST00000341316 SEL1L2Q5TEA6 688 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 KCNN1Q92952 543 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 FMO2Q99518 471 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 A0A0B4J269 797 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 E7EVH7 732 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 EDNRBP24530 442 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 CHRNA3P32297 505 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 WDR44Q5JSH3 913 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 EEPD1Q7L9B9 569 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 SLC13A5Q86YT5 568 aaPredicted RBP21.5■■□□□ 1.03
SPG7-202ENST00000341316 RIOX2Q8IUF8 465 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 MCOLN2Q8IZK6 566 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.5■■□□□ 1.032e-7■■■□□ 16.3
SPG7-202ENST00000341316 PCYOX1Q9UHG3 505 aa21.5■■□□□ 1.03
SPG7-202ENST00000341316 PPFIA2O75334 1257 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 RARAP10276 462 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 RRM1P23921 792 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 ABCD1P33897 745 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 CAPSQ13938 189 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 MICALCLQ6ZW33 695 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 OR5B17Q8NGF7 314 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms