RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MCOLN2Q8IZK6 566 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ASAP3Q8TDY4 903 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZNF653Q96CK0 615 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FMO2Q99518 471 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PLAAQ9Y263 795 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 DAPK3O43293 454 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FAM189A1O60320 539 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 VGLL4Q14135 290 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MTERF2Q49AM1 385 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SPATS2Q86XZ4 545 aaKnown RBP11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 BRSK2Q8IWQ3 736 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 DEPTORQ8TB45 409 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TCP11Q8WWU5 503 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 KRT35Q92764 455 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TATDN2Q93075 761 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FNBP1Q96RU3 617 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 POP1Q99575 1024 aaKnown RBP11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SPATC1LQ9H0A9 340 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ERVK-5Q9HDB9 667 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GGA2Q9UJY4 613 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 KCNH4Q9UQ05 1017 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 POLR2AP24928 1970 aaKnown RBP11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GOLGA6L10A6NI86 522 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 K7ERI5 159 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 VNN1O95497 513 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 HLA-DRAP01903 254 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 KRT14P02533 472 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PAEPP09466 180 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GUCY2FP51841 1108 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CUL2Q13617 745 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 IER5Q5VY09 327 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MON1BQ7L1V2 547 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 WDR49Q8IV35 697 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ANKRD35Q8N283 1001 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 BBXQ8WY36 941 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SEPT1Q8WYJ6 367 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 BICD1Q96G01 975 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 JPH2Q9BR39 696 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 HAPLN2Q9GZV7 340 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FAM107BQ9H098 131 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TSPYL1Q9H0U9 437 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ADARB2Q9NS39 739 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 HOMER3Q9NSC5 361 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NR2E1Q9Y466 385 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MYZAPP0CAP1 466 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NLRP11P59045 1033 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 C1QBPQ07021 282 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZNF844Q08AG5 666 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZNF526Q8TF50 670 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NFKBIZQ9BYH8 718 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 RBAKQ9NYW8 714 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 BTBD7Q9P203 1132 aa11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-201ENST00000340026 DNAJC25-GNG10A0A024R161 153 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PSTPIP1O43586 416 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CLTAP09496 248 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NR1D1P20393 614 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SOX10P56693 466 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 POU5F1BQ06416 359 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZNF568Q3ZCX4 644 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZDHHC24Q6UX98 284 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 C2orf40Q9H1Z8 148 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FAM124BQ9H5Z6 455 aaPredicted RBP11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MRPL47Q9HD33 250 aaKnown RBP11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GRHL1Q9NZI5 618 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TELO2Q9Y4R8 837 aa11.46□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MSCO60682 206 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 LSM8O95777 96 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 DLATP10515 647 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 PYGMP11217 842 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 PROZP22891 400 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 COILP38432 576 aaPredicted RBP11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 USP8P40818 1118 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 STAT5BP51692 787 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 MCL1Q07820 350 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 CAPSQ13938 189 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 MESDQ14696 234 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 PLEKHA7Q6IQ23 1121 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 SRLQ86TD4 932 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 ZDHHC14Q8IZN3 488 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 ABRAQ8N0Z2 381 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 HINFPQ9BQA5 517 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 PABPC3Q9H361 631 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 SCINQ9Y6U3 715 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 MROH7Q68CQ1 1323 aa11.46□□□□□ -0.58
TRAF3IP2-201ENST00000340026 TOM1L1O75674 476 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 CNMDO75829 334 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 PROSCO94903 275 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 CDH5P33151 784 aaPredicted RBP11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 NOMO3P69849 1222 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 SLMAPQ14BN4 828 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 TREML2Q5T2D2 321 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 ART4Q93070 314 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
TRAF3IP2-201ENST00000340026 PGM2Q96G03 612 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms