RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 HEXIM1O94992 359 aaKnown RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 TFAMQ00059 246 aaKnown RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 CDR2Q01850 454 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 IFI16Q16666 785 aaKnown RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 WDR44Q5JSH3 913 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 CST9Q5W186 159 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 USP37Q86T82 979 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 HES6Q96HZ4 224 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 FAM167AQ96KS9 214 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 FDXACB1Q9BRP7 624 aaPredicted RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 SELENOOQ9BVL4 669 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 MRPL4Q9BYD3 311 aaKnown RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 TMEM134Q9H6X4 195 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 NMRK2Q9NPI5 230 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 ABLIM1O14639 778 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 DDX3YO15523 660 aaKnown RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 RTN2O75298 545 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 TOM1L1O75674 476 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 GTF2A2P52657 109 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 MYL6P60660 151 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 GPC5P78333 572 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 CLDN10P78369 228 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 SLFN12LQ6IEE8 588 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 MORC4Q8TE76 937 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 CYFIP2Q96F07 1278 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 NUP85Q9BW27 656 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 CELF4Q9BZC1 486 aaKnown RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 STIM2Q9P246 746 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 FGGP02679 453 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 FAM153BP0C7A2 387 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 SMPD1P17405 629 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 GTF2H1P32780 548 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 NOP14P78316 857 aaKnown RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 NCOA4Q13772 614 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 FAM153CQ494X1 144 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.25
MBD1-203ENST00000339998 KATNBL1Q9H079 304 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 FAM153AQ9UHL3 310 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 NFU1Q9UMS0 254 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 PCDHB4Q9Y5E5 795 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 SCN4AP35499 1836 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 TARSL2A2RTX5 802 aaKnown RBP16.58■□□□□ 0.24
MBD1-203ENST00000339998 C22orf31O95567 290 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 ORC1Q13415 861 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 ZNF568Q3ZCX4 644 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 SPRYD7Q5W111 196 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 KCNV1Q6PIU1 500 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 ERAP1Q9NZ08 941 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 AKT3Q9Y243 479 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 PLXNB2O15031 1838 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 CXCL8P10145 99 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
MBD1-203ENST00000339998 COMTP21964 271 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 CCNA1P78396 465 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 ZBTB8OSQ8IWT0 167 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 EFCAB13Q8IY85 973 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 SHCBP1Q8NEM2 672 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 CCDC102AQ96A19 550 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 CGRRF1Q99675 332 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 IFT122Q9HBG6 1241 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 KIAA1586Q9HCI6 787 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 ERVK-5Q9HDB9 667 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 AMACRQ9UHK6 382 aa16.58■□□□□ 0.24
MBD1-203ENST00000339998 DIS3Q9Y2L1 958 aaKnown RBP16.58■□□□□ 0.24
MBD1-203ENST00000339998 GPR25O00155 361 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 KRIT1O00522 736 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 HBP1O60381 514 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 GUCY2FP51841 1108 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 TUBB4BP68371 445 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 GCNT1Q02742 428 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 CUL2Q13617 745 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 CDCA2Q69YH5 1023 aaPredicted RBP16.57■□□□□ 0.24
MBD1-203ENST00000339998 LMBR1Q8WVP7 490 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 MXD4Q14582 209 aaPredicted RBP16.57■□□□□ 0.24
MBD1-203ENST00000339998 ATF7IP2Q5U623 682 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 MAML3Q96JK9 1138 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 C16orf70Q9BSU1 422 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 UBXN6Q9BZV1 441 aa16.57■□□□□ 0.24
MBD1-203ENST00000339998 MEFVO15553 781 aaPredicted RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 RRM1P23921 792 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 MBTD1Q05BQ5 628 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
MBD1-203ENST00000339998 BRSK2Q8IWQ3 736 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 ZNF564Q8TBZ8 553 aaPredicted RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 CASKIN2Q8WXE0 1202 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 CXCL16Q9H2A7 254 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 CNOT8Q9UFF9 292 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 LDHAP00338 332 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 GH1P01241 217 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 ITIH3Q06033 890 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 TSEN2Q8NCE0 465 aaKnown RBP16.56■□□□□ 0.24
MBD1-203ENST00000339998 TCP11Q8WWU5 503 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.56■□□□□ 0.247e-7■■□□□ 13.3
MBD1-203ENST00000339998 TRIM31Q9BZY9 425 aa16.56■□□□□ 0.24
MBD1-203ENST00000339998 TMEM59LQ9UK28 342 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms