RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 PHTF1Q9UMS5 762 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ADGRA2Q96PE1 1338 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CFAP69A5D8W1 941 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM191CA6NGB0 347 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TTLL8A6PVC2 850 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SPOPO43791 374 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 LCA5LO95447 670 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM191BP0C7N4 346 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TAC1P20366 129 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PDE1BQ01064 536 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CENPCQ03188 943 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MORF4L2Q15014 288 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PUS10Q3MIT2 529 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 RBM20Q5T481 1227 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PPP1R18Q6NYC8 613 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TRPC4APQ8TEL6 797 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF483Q8TF39 744 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 EDC3Q96F86 508 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FANCFQ9NPI8 374 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MCF2LO15068 1137 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 POLR2DO15514 142 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 GAS7O60861 476 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 DDNO94850 711 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 HK2P52789 917 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PRKAA2P54646 552 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 NPEPPSP55786 919 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 STX5Q13190 355 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SNX17Q15036 470 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 KLHL38Q2WGJ6 581 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MAP1SQ66K74 1059 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PLEKHH3Q7Z736 793 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 NOSTRINQ8IVI9 506 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ARHGEF1Q92888 912 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 GPR20Q99678 358 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 BRD8Q9H0E9 1235 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 C20orf96Q9NUD7 363 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CASP8AP2Q9UKL3 1982 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 COL2A1P02458 1487 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SPDYE2BA6NHP3 402 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PSMD14O00487 310 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ANGPT2O15123 496 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 F13A1P00488 732 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SPDYE6P0CI01 402 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SLC20A2Q08357 652 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 THOC5Q13769 683 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SPATA1Q5VX52 437 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 G2E3Q7L622 706 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PEX26Q7Z412 305 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 OOSP2Q86WS3 158 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CCDC36Q8IYA8 594 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 BEST2Q8NFU1 509 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SPDYE1Q8NFV5 336 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TDRD7Q8NHU6 1098 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SKA2Q8WVK7 121 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CRAMP1Q96RY5 1269 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 KLF6Q99612 283 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CCT7Q99832 543 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FAM192AQ9GZU8 254 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 GGA2Q9UJY4 613 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 INPP5FQ9Y2H2 1132 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SH3BP1Q9Y3L3 701 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PCDHB6Q9Y5E3 794 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MYO5AQ9Y4I1 1855 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ADGRA3Q8IWK6 1321 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 H7C4K7 107 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 FGBP02675 491 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 ALPPL2P10696 532 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 CPB1P15086 417 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 MAPK9P45984 424 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 CAPZA2P47755 286 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 PAPOLAP51003 745 aaKnown RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 PMS2P54278 862 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 OLR1P78380 273 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 GFPT1Q06210 699 aaPredicted RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 TRIM71Q2Q1W2 868 aaKnown RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 CYB5D1Q6P9G0 228 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 BNIPLQ7Z465 357 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 ITIH5Q86UX2 942 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 SPATA2LQ8IUW3 424 aaPredicted RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 CXorf38Q8TB03 319 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 RBM41Q96IZ5 413 aaKnown RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 ZBTB18Q99592 522 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 METTL22Q9BUU2 404 aaPredicted RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 CAPS2Q9BXY5 557 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 TRIM8Q9BZR9 551 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 MROH8Q9H579 483 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 UBN1Q9NPG3 1134 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 HESX1Q9UBX0 185 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 PHF11Q9UIL8 331 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 COL4A3BPQ9Y5P4 624 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 TTLL1O95922 423 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 TPP2P29144 1249 aaPredicted RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 STAT5AP42229 794 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 STAT5BP51692 787 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 RAPGEF1Q13905 1077 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 CRYMQ14894 314 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 ARL13BQ3SXY8 428 aa3.46□□□□□ -1.85
CSMD3-202ENST00000339701 NBPF12Q5TAG4 269 aaPredicted RBP3.46□□□□□ -1.85
CSMD3-202ENST00000339701 SLFN12LQ6IEE8 588 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms