RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 CALM1P0DP23 149 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 CALM2P0DP24 149 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 CALM3P0DP25 149 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 MYBP10242 640 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 AP1B1Q10567 949 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 PABPC4Q13310 644 aaKnown RBP eCLIP9.86□□□□□ -0.83
RPGR-202ENST00000339363 C16orf72Q14CZ0 275 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 MTFR1Q15390 333 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 SEL1L2Q5TEA6 688 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 THOC7Q6I9Y2 204 aaKnown RBP9.86□□□□□ -0.83
RPGR-202ENST00000339363 NLRP9Q7RTR0 991 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 ATP6V0A1Q93050 837 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 ERLEC1Q96DZ1 483 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 CEP95Q96GE4 821 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 ERVK-5Q9HDB9 667 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 SLAIN2Q9P270 581 aa9.86□□□□□ -0.83
RPGR-202ENST00000339363 LOC102724428A0A0B4J2F2 783 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 TMEM247A6NEH6 219 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 KRT38O76015 456 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 CCNB1P14635 433 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 RFC1P35251 1148 aaPredicted RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 SLC16A2P36021 539 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SIK1P57059 783 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 OVGP1Q12889 678 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SPARCL1Q14515 664 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 PPP2R5BQ15173 497 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 ACSBG2Q5FVE4 666 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 MDH1BQ5I0G3 518 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 DCAF12L1Q5VU92 463 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 C1orf228Q6PIY5 440 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SLC25A41Q8N5S1 370 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 PPP2R3CQ969Q6 453 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 ELMO3Q96BJ8 720 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 MAGEB18Q96M61 343 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 DHX36Q9H2U1 1008 aaKnown RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 EPB41L4BQ9H329 900 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 TMEM59LQ9UK28 342 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 USP20Q9Y2K6 914 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 CASZ1Q86V15 1759 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 NUDT17P0C025 328 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 NAT1P18440 290 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 PPP1R2P41236 205 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 PCYT1AP49585 367 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 OXCT1P55809 520 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 DCAF17Q5H9S7 520 aaPredicted RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 LRRC47Q8N1G4 583 aaKnown RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 STK33Q9BYT3 514 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 ADAM7Q9H2U9 754 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 PCDHA2Q9Y5H9 948 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 NDC80O14777 642 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 EXOC3O60645 756 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 GAS8O95995 478 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 CLPTM1O96005 669 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 TSPY3P0CV98 308 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 TSPY8P0CW00 308 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 CASP4P49662 377 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SNAP25P60880 206 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 NAA20P61599 178 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 KYNUQ16719 465 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 IRF2BP2Q7Z5L9 587 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 ZDHHC14Q8IZN3 488 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 LARP4BQ92615 738 aaKnown RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 CEP72Q9P209 647 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 SEC63Q9UGP8 760 aaKnown RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 CHKBQ9Y259 395 aa9.85□□□□□ -0.83
RPGR-202ENST00000339363 RBMX2Q9Y388 322 aaKnown RBP9.85□□□□□ -0.83
RPGR-202ENST00000339363 MEIS1O00470 390 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 DDX3XO00571 662 aaKnown RBP eCLIP9.84□□□□□ -0.83
RPGR-202ENST00000339363 RIPK2O43353 540 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 HARSP12081 509 aaKnown RBP9.84□□□□□ -0.83
RPGR-202ENST00000339363 RFC4P35249 363 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 ARSHQ5FYA8 562 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 ENDOVQ8N8Q3 282 aaKnown RBP9.84□□□□□ -0.83
RPGR-202ENST00000339363 SMYD1Q8NB12 490 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 MXD3Q9BW11 206 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 GRIP2Q9C0E4 1043 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 SMYD3Q9H7B4 428 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 MKNK2Q9HBH9 465 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 METTL14Q9HCE5 456 aaKnown RBP9.84□□□□□ -0.83
RPGR-202ENST00000339363 EURLQ9NYK6 297 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 AIPL1Q9NZN9 384 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 NDUFA13Q9P0J0 144 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 ZNF212Q9UDV6 495 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 IRS2Q9Y4H2 1338 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 COL22A1Q8NFW1 1626 aaPredicted RBP9.84□□□□□ -0.83
RPGR-202ENST00000339363 DNAH12Q6ZR08 3092 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 RSPH10B2B2RC85 870 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 ZBTB39O15060 712 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 SPTLC1O15269 473 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 USP1O94782 785 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 RSPH10BP0C881 870 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 ALDH1B1P30837 517 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 PHBP35232 272 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 KCNJ1P48048 391 aa9.84□□□□□ -0.83
RPGR-202ENST00000339363 EIF2B2P49770 351 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms