RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 KIAA0391O15091 583 aaKnown RBP20.08■□□□□ 0.81
PSPC1-201ENST00000338910 PLTPP55058 493 aa20.08■□□□□ 0.81
PSPC1-201ENST00000338910 TTLL12Q14166 644 aaPredicted RBP20.08■□□□□ 0.81
PSPC1-201ENST00000338910 TNFAIP8L3Q5GJ75 292 aa20.08■□□□□ 0.81
PSPC1-201ENST00000338910 CDCA2Q69YH5 1023 aaPredicted RBP20.08■□□□□ 0.81
PSPC1-201ENST00000338910 ZNF746Q6NUN9 644 aaPredicted RBP20.08■□□□□ 0.81
PSPC1-201ENST00000338910 SLC9A9Q8IVB4 645 aa20.08■□□□□ 0.81
PSPC1-201ENST00000338910 DIS3Q9Y2L1 958 aaKnown RBP20.08■□□□□ 0.81
PSPC1-201ENST00000338910 SMIM23A6NLE4 172 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 MAFGO15525 162 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 KCNA2P16389 499 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 COPB2P35606 906 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 PDE6CP51160 858 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 GALCP54803 685 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 DLG4P78352 724 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 ADCY2Q08462 1091 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 BFSP1Q12934 665 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 SWSAP1Q6NVH7 229 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 ZSWIM2Q8NEG5 633 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 TMEM109Q9BVC6 243 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 CARD9Q9H257 536 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 OSGEPQ9NPF4 335 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 BTBD7Q9P203 1132 aa20.08■□□□□ 0.8
PSPC1-201ENST00000338910 MAPTP10636 758 aaKnown RBP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 CCND1P24385 295 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 CALRP27797 417 aaKnown RBP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 IFNAR2P48551 515 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 SOX10P56693 466 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 LBX2Q6XYB7 198 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 USP50Q70EL3 339 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 JAMLQ86YT9 394 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 ARMC2Q8NEN0 867 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 OLIG1Q8TAK6 271 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 U2AF1L4Q8WU68 220 aaKnown RBP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 KIFC3Q9BVG8 833 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 ECT2Q9H8V3 914 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 ANKEF1Q9NU02 776 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 IGF2BP3O00425 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 ZNF862O60290 1169 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 DIAPH2O60879 1101 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 GFPT2O94808 682 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 DHX34Q14147 1143 aaKnown RBP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 CNGA2Q16280 664 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 UBAP2Q5T6F2 1119 aaKnown RBP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 CROCCP2Q86T23 111 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 ANKRD13AQ8IZ07 590 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 ZNF483Q8TF39 744 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-201ENST00000338910 CEP170P1Q96L14 293 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 SLC5A4Q9NY91 659 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 GRHL1Q9NZI5 618 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 SNX24Q9Y343 169 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 NCANO14594 1321 aa20.07■□□□□ 0.8
PSPC1-201ENST00000338910 GOLGA6L10A0A0M3HER8 536 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 GCKP35557 465 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 GTF2BQ00403 316 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 PPATQ06203 517 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 ALCAMQ13740 583 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 NAP1L3Q99457 506 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 SEMA4AQ9H3S1 761 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 USP15Q9Y4E8 981 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 KIAA1217Q5T5P2 1943 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 SMNDC1O75940 238 aaKnown RBP eCLIP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 KRT13P13646 458 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 CNTN2Q02246 1040 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 FSTL1Q12841 308 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 BNIP1Q12981 228 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 PRPF4BQ13523 1007 aaKnown RBP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 EAPPQ56P03 285 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 ADAT2Q7Z6V5 191 aaKnown RBP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 ERO1BQ86YB8 467 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 ANKRD35Q8N283 1001 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 CEP120Q8N960 986 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 EPS8L3Q8TE67 593 aaKnown RBP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 JPH1Q9HDC5 661 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-201ENST00000338910 DNAJC12Q9UKB3 198 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 PAPPA2Q9BXP8 1791 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 LOXHD1Q8IVV2 1947 aa20.06■□□□□ 0.8
PSPC1-201ENST00000338910 MYL7Q01449 175 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 SLC30A5Q8TAD4 765 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 LNX1Q8TBB1 728 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 SLC35G2Q8TBE7 412 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 RFFLQ8WZ73 363 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 PRCCQ92733 491 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 SENP7Q9BQF6 1050 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 GGT7Q9UJ14 662 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 A0A0G2JLL6 359 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 MYBPC2Q14324 1141 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 DRAP1Q14919 205 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 OTUD6AQ7L8S5 288 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 PRRT2Q7Z6L0 340 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 GBP7Q8N8V2 638 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 RDM1Q8NG50 284 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 ZC3H15Q8WU90 426 aaKnown RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 TIPINQ9BVW5 301 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 INTS2Q9H0H0 1204 aaKnown RBP20.05■□□□□ 0.8
PSPC1-201ENST00000338910 ARHGEF3Q9NR81 526 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 HSPBP1Q9NZL4 362 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 SLC9A2Q9UBY0 812 aa20.05■□□□□ 0.8
PSPC1-201ENST00000338910 GOLGA8IPA6NC78 632 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 GOLGA8JA6NMD2 632 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms